Gene
RNA
| Item | Value |
|---|---|
| gene id | G1132026 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98665515 ~ 98666422 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288467 | False | 206 | lncRNA | 0.30 | 2 | 98665515 | 98666422 |
| TU1288466 | True | 292 | lncRNA | 0.30 | 2 | 98665865 | 98666422 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487124 | LOC105006040 | coding | upstream | 101276 | 98425760 ~ 98564239 (+) |
| LOC118936514 | smim22 | coding | upstream | 399488 | 98259570 ~ 98268855 (+) |
| LOC110516721 | LOC105012791 | coding | upstream | 447230 | 98187732 ~ 98218285 (+) |
| LOC118937837 | LOC106594247 | coding | upstream | 543437 | 98101643 ~ 98122078 (+) |
| LOC110485325 | LOC105012794 | coding | upstream | 575142 | 98065664 ~ 98090718 (+) |
| LOC110516605 | LOC106592968 | coding | downstream | 309911 | 98976333 ~ 98977246 (+) |
| LOC110539183 | LOC106606365 | coding | downstream | 404574 | 99070996 ~ 99088300 (+) |
| epn3a | LOC105006167 | coding | downstream | 450979 | 99117401 ~ 99175955 (+) |
| LOC110538843 | LOC106601911 | coding | downstream | 516695 | 99183117 ~ 99188055 (+) |
| LOC110538844 | tbcd | coding | downstream | 522463 | 99188885 ~ 99322871 (+) |
| G1132024 | NA | non-coding | upstream | 84 | 98665117 ~ 98665431 (+) |
| G1132020 | NA | non-coding | upstream | 3804 | 98661501 ~ 98661711 (+) |
| G1132019 | NA | non-coding | upstream | 4783 | 98660409 ~ 98660732 (+) |
| G1131942 | NA | non-coding | upstream | 47767 | 98616199 ~ 98617748 (+) |
| G1131932 | NA | non-coding | upstream | 81620 | 98583219 ~ 98583895 (+) |
| G1132029 | NA | non-coding | downstream | 2408 | 98668830 ~ 98669030 (+) |
| G1132036 | NA | non-coding | downstream | 15009 | 98681431 ~ 98681767 (+) |
| G1132037 | NA | non-coding | downstream | 15898 | 98682320 ~ 98682578 (+) |
| G1132053 | NA | non-coding | downstream | 47172 | 98713594 ~ 98713851 (+) |
| G1132055 | NA | non-coding | downstream | 49340 | 98715762 ~ 98716312 (+) |
| G1131438 | NA | other | upstream | 843458 | 97820724 ~ 97822057 (+) |
| G1130780 | LOC106606334 | other | upstream | 1502436 | 97162262 ~ 97163079 (+) |
| LOC118937804 | LOC106591169 | other | upstream | 1963578 | 96676774 ~ 96702725 (+) |
| G1130570 | alg1 | other | upstream | 2032063 | 96618256 ~ 96633452 (+) |
| G1132060 | NA | other | downstream | 58435 | 98724857 ~ 98725197 (+) |
| G1132058 | NA | other | downstream | 97537 | 98762440 ~ 98767257 (+) |
| G1132082 | NA | other | downstream | 115717 | 98782139 ~ 98783327 (+) |
| G1132093 | NA | other | downstream | 129336 | 98795758 ~ 98797512 (+) |
| G1132174 | NA | other | downstream | 308021 | 98974443 ~ 98974926 (+) |
