Gene
RNA
| Item | Value |
|---|---|
| gene id | G1132228 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98680290 ~ 98680647 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: bromodomain-containing protein DDB_G0280777-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288742 | True | 316 | lncRNA | 0.39 | 2 | 98680290 | 98680647 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487126 | LOC106602016 | coding | downstream | 108776 | 98566396 ~ 98571514 (-) |
| LOC110485331 | ppl | coding | downstream | 299378 | 98333131 ~ 98380912 (-) |
| LOC110517726 | glyr1 | coding | downstream | 363385 | 98283462 ~ 98316905 (-) |
| LOC110487128 | rogdi | coding | downstream | 397137 | 98265920 ~ 98283153 (-) |
| LOC118936513 | cog1 | coding | downstream | 420646 | 98230363 ~ 98259687 (-) |
| LOC110514497 | LOC106602019 | coding | upstream | 85458 | 98766105 ~ 98906443 (-) |
| LOC110539185 | hgs | coding | upstream | 301114 | 98981732 ~ 99019633 (-) |
| LOC110538838 | LOC105029615 | coding | upstream | 341311 | 99021958 ~ 99027957 (-) |
| btr02 | LOC106606318 | coding | upstream | 347521 | 99028168 ~ 99040834 (-) |
| LOC110538834 | LOC106601838 | coding | upstream | 361372 | 99042019 ~ 99045620 (-) |
| G1132016 | NA | non-coding | downstream | 26777 | 98652991 ~ 98653513 (-) |
| G1132012 | NA | non-coding | downstream | 62505 | 98615144 ~ 98617785 (-) |
| G1132001 | NA | non-coding | downstream | 103664 | 98575406 ~ 98576626 (-) |
| G1131995 | LOC106602015 | non-coding | downstream | 118835 | 98560788 ~ 98561455 (-) |
| G1131980 | NA | non-coding | downstream | 168012 | 98511591 ~ 98512278 (-) |
| G1132229 | NA | non-coding | upstream | 1671 | 98682318 ~ 98682578 (-) |
| G1132232 | NA | non-coding | upstream | 11676 | 98692323 ~ 98692640 (-) |
| G1132236 | NA | non-coding | upstream | 20794 | 98701441 ~ 98705778 (-) |
| G1132244 | NA | non-coding | upstream | 55022 | 98735669 ~ 98738867 (-) |
| G1132225 | NA | non-coding | upstream | 75856 | 98756503 ~ 98757397 (-) |
| G1131863 | NA | other | downstream | 296475 | 98382970 ~ 98383815 (-) |
| LOC110485313 | LOC106535622 | other | downstream | 705570 | 97959753 ~ 97974748 (-) |
| G1131666 | NA | other | downstream | 819772 | 97857599 ~ 97860518 (-) |
| G1131720 | NA | other | downstream | 826697 | 97852786 ~ 97853593 (-) |
| G1132328 | NA | other | upstream | 325980 | 99006627 ~ 99010112 (-) |
| LOC118937838 | LOC106606233 | other | upstream | 372857 | 99052890 ~ 99059256 (-) |
| LOC110538840 | LOC106601903 | other | upstream | 411069 | 99090621 ~ 99092245 (-) |
| G1132564 | NA | other | upstream | 485301 | 99165948 ~ 99166607 (-) |
| G1132569 | LOC106606209 | other | upstream | 493018 | 99173665 ~ 99177478 (-) |
