G1132053


Basic Information

Item Value
gene id G1132053
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98713594 ~ 98713851 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1288505
tcaccaccctggacggttctgacctagaatatgtggacaactataaatacctaggtgtctggctagactgtaaactctccttccagactcatattaaacatctccaatccaaaatcaatctgctttctatttcgcaacaaagcctccttcactcaagccgtcaaacttaccctagtaaaactgactatcctaccgatcatcgtcttcggtgatgtcatctacaaaatagtttCCAATACTCTACCGAGCAAACTGGAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1288505 True 258 lncRNA 0.42 1 98713594 98713851

Neighbor

gene id symbol gene type direction distance location
LOC110487124 LOC105006040 coding upstream 149355 98425760 ~ 98564239 (+)
LOC118936514 smim22 coding upstream 447567 98259570 ~ 98268855 (+)
LOC110516721 LOC105012791 coding upstream 495309 98187732 ~ 98218285 (+)
LOC118937837 LOC106594247 coding upstream 591516 98101643 ~ 98122078 (+)
LOC110485325 LOC105012794 coding upstream 623221 98065664 ~ 98090718 (+)
LOC110516605 LOC106592968 coding downstream 262482 98976333 ~ 98977246 (+)
LOC110539183 LOC106606365 coding downstream 357145 99070996 ~ 99088300 (+)
epn3a LOC105006167 coding downstream 403550 99117401 ~ 99175955 (+)
LOC110538843 LOC106601911 coding downstream 469266 99183117 ~ 99188055 (+)
LOC110538844 tbcd coding downstream 475034 99188885 ~ 99322871 (+)
G1132037 NA non-coding upstream 31016 98682320 ~ 98682578 (+)
G1132036 NA non-coding upstream 31827 98681431 ~ 98681767 (+)
G1132029 NA non-coding upstream 44564 98668830 ~ 98669030 (+)
G1132026 NA non-coding upstream 47172 98665515 ~ 98666422 (+)
G1132024 NA non-coding upstream 48163 98665117 ~ 98665431 (+)
G1132055 NA non-coding downstream 1911 98715762 ~ 98716312 (+)
G1132056 NA non-coding downstream 3152 98717003 ~ 98717360 (+)
G1132064 NA non-coding downstream 22831 98736682 ~ 98739916 (+)
G1132067 NA non-coding downstream 26464 98740315 ~ 98741914 (+)
G1132071 NA non-coding downstream 32663 98746514 ~ 98747637 (+)
G1131438 NA other upstream 891537 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 1550515 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 2011657 96676774 ~ 96702725 (+)
G1130570 alg1 other upstream 2080142 96618256 ~ 96633452 (+)
G1132060 NA other downstream 11006 98724857 ~ 98725197 (+)
G1132058 NA other downstream 50108 98762440 ~ 98767257 (+)
G1132082 NA other downstream 68288 98782139 ~ 98783327 (+)
G1132093 NA other downstream 81907 98795758 ~ 98797512 (+)
G1132174 NA other downstream 260592 98974443 ~ 98974926 (+)

Expression


Co-expression Network