G1132058


Basic Information

Item Value
gene id G1132058
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98762440 ~ 98767257 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1288512
GGTgtaaatgccagatgggctggccCCTCTTCAgcccagtgggcctgtctaaACCAGGGGTTTGGTgtaaatgccagatgggctggccCCTCTTCAgcccagtgggcctgtctaaACCAGGGGTTTGGTgtaaatgccagatgggctggccCCTCTAAACCAGGGGTTTCTACACAATAATAATGATGCGTCTAATGATGAAAACATTAGATAGACCCAGTCCAGTCCTGCATTATTAACATGTACAATATATATAGTAGCCAGACTGAATGAAGAAAACCACTGTCTTTTCTTCTACATTCTGATCCCATCTTCTAAAAAATAACACACTTGTCACGATTACAACACTGACAACTCACAAGTCGAATATGAAGTCAGATATTCCAGGTTGTAACCGTCTGTTGTGTTCAGGAAgcagaaaaaaataataacattCTGAAATTGGTGGCTTTACATTAATGTATAGAATGTGATGATAATCAACAGTATCACaccatcattattatcatcatcaagatcatcaccaccatcatcatcatcatcatcattatcttcatcatcttcatcatcaccaccaccatcatcaacatcatcatcatcaccaccatcctcatcattatcttcatcatcatcaccaccatcttcATCATTATCTTCATCATCACCGTCATCAACATTATCAACATCACCATGAACATTATTATCACTAGCTGTATCCGTTATCTGTGTCAGCCCCGTTATCTGTGTCAGCCCCGTTATCTGTGTCAGCCCCGTTATCTGTGTCAGCTCCATTATCTGTGTCAGCTCCGTTATCTGTGTCAGCCCCGTCATCTGTGTCAGCTCCATTATCTGTGTCAGCTCTGTTATCTGTGTCAGCTCTGTTATCTGTGTCAGCTCCGTTATCTGTGTTAATCAATATTGTTCTAATTATAGACGTATTATGTGTTATGTATATCCCCAATGTATTGGGtcgctaacatggctgccatactTTAAATACATGGTTTTCATGGTCCTGTCCTGGTCCTCAGGTCAGGGGGGCACTATGGGGGTAGAACCCAGCGGTGGTGACCTTACACTGGGGTTAGCTCTACAGGAATGCTGCCTCTGGGCAAGTCCCAAatagcactatatagggaatagggtgccattaaggAAGCAACCTATCTCTCTGGTCCTATACAAACTCAGGTTGAACTgatctacaactctctctctctctcttccccctcgctcactctctctctcccccccactctctctctctctctctctctctctctctcccctc
>TU1288511
ccctgcctctctcacctctctctctctctctctctctctctctctctcgtcatccAACCAGAATGGACAGCAAGGTCAAGGGGGTATCTCATCAAAAGCTTTACAAAGAACTATGAAGGCTATGAACATGTATTCATGTATTGGTGTTGTTTGTTCTATCATGATTTCATCTGTTTTTCTGTTAGTCATGTGGCCTGTTTTTTTGTTGGTGTTGTTTGAATGCCCAGTTCATTCTTCCTGTACTGTCTCCAGTACCAGAAAACACATCACAatttaacacaacaacaacaacaacaataataacaacaacaacaacaacatataccAGAGGCTAAAGCTAAGACCCTGTATTTAGCAACTTGAGGTTTCTGGGTATTATTTTACACATTTAGCTTTGGAAGTTGTTTTCATTCTTCTCCTTTTTGGCTTTGTGAACATGCAACAGTGAGTCCTGCAACAGTGAGACCTGCAGCAGTGAGACCTGCAACAGTGAGTCCTGCAGTAGTGAGTCCTGCAACAGTGAGTCCTGCAACAGTGAGTCCTGCAACAGTGAGTCCTGCAACAGTGAGTCCTGCAACTGTGAGTCCTGCAGTAGTGAGTCCTGCAACAGTGAGTCCTGCAACAGTGAGTCCTGCAACAGTGAGTCCTGCAGCAGTGAGTCCTGCAACAGTGAGACCTGCAGCAGTGAGTCCTGCAGCAGTGAGTCCTGCAGCAGTGAGTCAATGCTGTCTGTTTGACTGTCTGTTGAAGAGAAAACACATATCAATCCATATGACTCGCTGGACATCCACTGTCATAGGACGTCAGAgggaggtctggtctgggtcAGAGGGGTCCAACATGGGAGGTCTGGGTCAGAGGGGTCCAACATGGGAGGTCTGGGTCAGAGGGGTCCAACATGGGAGGTCTGGGTCAGAGGGGTCCAACATGGGAGGTCTGGGTCAAAGGGGTCCAACATGGGAGGGCTGGTCTGGGTCAGAGGGGTCCAACATgggaggtctggtctgggtcAGAGGGGTCCAACATGGGAGGTCTTGTCTGGGTCAGAGGGGTCCAACATGGGAGGGCTGGTCTGGGTCAGTGGGGTCCAACATGGGAGGGCTGGTCTGGGTCAGAGGGGTCCAACATGGGAGGGCTGGTCTGGGTCAGAGGGGTCCAACATGGGAGGGCTGGTCTGGGTCAGAGGGGTCCAACATGGGAGGGCTGGTCTGGGTCAGTGGGGTCCAACATGGTAGGTCTAgcttgttctatgtttctctCATTTGGCTGTGGATTGGAGAGGGTCGAGTAGgtgtctctctctaccactaacACTGTTTCAGGGTGACGATACGAACATTGAGACACACACTTGTCCTGGGTCTGTCAAGGCCATCTCGCTCATTAACATAGGTCCAGGGTGACGGCCATTGAGAAACACACCTCTCCTGAAACACACTGCCCAGCTCCAGAGTGTTACCAGGGTGTTACGTCATTAATCTTCCCCGTCCTCTCcagtctctgctgtagttaccAGGGTGTTACGTCATTAATCTTCCCCGTCCTCTCcagtctctgctgtagttaccAGGGTGTTACGTCATTAATCTTCCCCGTCCTCTCcagtctctgctgtagttaccAGGGTGTTACGTCATTAATCTTCCCCGTCCTCTCcagtctctgctgtagttaccAGGGTGTTACGTCATTAATCTTCCCCGTCCTCTCcagtctctgctgtagttaccAGGGTGTTACGTCATTAATCTTCCCCGTCCTCTCcagtctctgctgtagttaccAGGGTGTTACGTTATTAATCTTCCCCATCCTCTCCAGTCTCAGAGGTGGCTCTCTGCATTTCCTCTAGGAGCCTCGTAACACTCTGACACCCTGTCCGTCAAGCAGATTTCATCCATATGATCCTCTATCAGTGTGTGACTACAGCTGATGGTGCCCTCACGTGGTAGGGAGGGAAACTGCATGTTCGACCCTGTGTTCTTCCTGCTCCGCCCCATGCCATTCTGACAGCTCACCACCAGGAGGTGCTTCTCCTCTGGGGAGCAGCCTGGGCCCTGGCCAGGGGGAGCAGGGGAGGAGGTGGTGATGTCggggaggtgggggtggaggagcATTGAGGAGGGGTGCGAGGGGTCGTGACCCCCGTGAGCGTGCTCGTGACCCAGCAGGCTGCTGCTCTTAGTGTTGAGGTGGGGCGTCTGGCTATAGGTGTGGCGGTACTCCTCCTCGATGTTACGACCCAGCTTCCAACGCTTCCACTTCTTCAGGATCTCTGA

Function

NR:

description
PREDICTED: glucagon receptor-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1288512 False 1291 lncRNA 0.44 2 98762440 98763784
TU1288511 True 2279 TUCP 0.52 5 98763959 98767257

Neighbor

gene id symbol gene type direction distance location
LOC110487124 LOC105006040 coding upstream 198201 98425760 ~ 98564239 (+)
LOC118936514 smim22 coding upstream 496413 98259570 ~ 98268855 (+)
LOC110516721 LOC105012791 coding upstream 544155 98187732 ~ 98218285 (+)
LOC118937837 LOC106594247 coding upstream 640362 98101643 ~ 98122078 (+)
LOC110485325 LOC105012794 coding upstream 672067 98065664 ~ 98090718 (+)
LOC110516605 LOC106592968 coding downstream 212549 98976333 ~ 98977246 (+)
LOC110539183 LOC106606365 coding downstream 307212 99070996 ~ 99088300 (+)
epn3a LOC105006167 coding downstream 353617 99117401 ~ 99175955 (+)
LOC110538843 LOC106601911 coding downstream 419333 99183117 ~ 99188055 (+)
LOC110538844 tbcd coding downstream 425101 99188885 ~ 99322871 (+)
G1132071 NA non-coding upstream 14803 98746514 ~ 98747637 (+)
G1132067 NA non-coding upstream 20526 98740315 ~ 98741914 (+)
G1132064 NA non-coding upstream 22524 98736682 ~ 98739916 (+)
G1132056 NA non-coding upstream 45080 98717003 ~ 98717360 (+)
G1132055 NA non-coding upstream 46128 98715762 ~ 98716312 (+)
G1132080 NA non-coding downstream 12697 98776481 ~ 98777682 (+)
G1132075 NA non-coding downstream 22931 98786715 ~ 98788846 (+)
G1132097 NA non-coding downstream 37666 98801450 ~ 98802296 (+)
G1132100 NA non-coding downstream 41643 98805427 ~ 98806404 (+)
G1132068 NA non-coding downstream 47164 98810948 ~ 98812884 (+)
G1132060 NA other upstream 37243 98724857 ~ 98725197 (+)
G1131438 NA other upstream 940383 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 1599361 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 2060503 96676774 ~ 96702725 (+)
G1132058 NA other downstream 175 98762440 ~ 98767257 (+)
G1132082 NA other downstream 18355 98782139 ~ 98783327 (+)
G1132093 NA other downstream 31974 98795758 ~ 98797512 (+)
G1132174 NA other downstream 210659 98974443 ~ 98974926 (+)
G1132187 NA other downstream 237572 99001356 ~ 99001773 (+)

Expression


Co-expression Network