Gene
RNA
| Item | Value |
|---|---|
| gene id | G1132080 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98776481 ~ 98777682 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ribosomally synthesized cyclic peptide ustiloxin B precursosr-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288544 | False | 602 | lncRNA | 0.43 | 3 | 98776481 | 98777682 |
| TU1288545 | True | 497 | lncRNA | 0.43 | 2 | 98776481 | 98777682 |
98,773,600
98,774,000
98,774,400
98,774,800
98,775,200
98,775,600
98,776,000
98,776,400
98,776,800
98,777,200
98,777,600
98,778,000
98,778,400
98,778,800
98,779,200
98,779,600
98,780,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487124 | LOC105006040 | coding | upstream | 212242 | 98425760 ~ 98564239 (+) |
| LOC118936514 | smim22 | coding | upstream | 510454 | 98259570 ~ 98268855 (+) |
| LOC110516721 | LOC105012791 | coding | upstream | 558196 | 98187732 ~ 98218285 (+) |
| LOC118937837 | LOC106594247 | coding | upstream | 654403 | 98101643 ~ 98122078 (+) |
| LOC110485325 | LOC105012794 | coding | upstream | 686108 | 98065664 ~ 98090718 (+) |
| LOC110516605 | LOC106592968 | coding | downstream | 198651 | 98976333 ~ 98977246 (+) |
| LOC110539183 | LOC106606365 | coding | downstream | 293314 | 99070996 ~ 99088300 (+) |
| epn3a | LOC105006167 | coding | downstream | 339719 | 99117401 ~ 99175955 (+) |
| LOC110538843 | LOC106601911 | coding | downstream | 405435 | 99183117 ~ 99188055 (+) |
| LOC110538844 | tbcd | coding | downstream | 411203 | 99188885 ~ 99322871 (+) |
| G1132058 | NA | non-coding | upstream | 12697 | 98762440 ~ 98767257 (+) |
| G1132071 | NA | non-coding | upstream | 28844 | 98746514 ~ 98747637 (+) |
| G1132067 | NA | non-coding | upstream | 34567 | 98740315 ~ 98741914 (+) |
| G1132064 | NA | non-coding | upstream | 36565 | 98736682 ~ 98739916 (+) |
| G1132056 | NA | non-coding | upstream | 59121 | 98717003 ~ 98717360 (+) |
| G1132075 | NA | non-coding | downstream | 9033 | 98786715 ~ 98788846 (+) |
| G1132097 | NA | non-coding | downstream | 23768 | 98801450 ~ 98802296 (+) |
| G1132100 | NA | non-coding | downstream | 27745 | 98805427 ~ 98806404 (+) |
| G1132068 | NA | non-coding | downstream | 33266 | 98810948 ~ 98812884 (+) |
| G1132114 | NA | non-coding | downstream | 56678 | 98834360 ~ 98834956 (+) |
| G1132060 | NA | other | upstream | 51284 | 98724857 ~ 98725197 (+) |
| G1131438 | NA | other | upstream | 954424 | 97820724 ~ 97822057 (+) |
| G1130780 | LOC106606334 | other | upstream | 1613402 | 97162262 ~ 97163079 (+) |
| G1132082 | NA | other | downstream | 4457 | 98782139 ~ 98783327 (+) |
| G1132093 | NA | other | downstream | 18076 | 98795758 ~ 98797512 (+) |
| G1132174 | NA | other | downstream | 196761 | 98974443 ~ 98974926 (+) |
| G1132187 | NA | other | downstream | 223674 | 99001356 ~ 99001773 (+) |
