Gene
RNA
| Item | Value |
|---|---|
| gene id | G1132174 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98974443 ~ 98974926 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: neuronal PAS domain-containing protein 4-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288658 | True | 484 | TUCP | 0.44 | 1 | 98974443 | 98974926 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487124 | LOC105006040 | coding | upstream | 410204 | 98425760 ~ 98564239 (+) |
| LOC118936514 | smim22 | coding | upstream | 708416 | 98259570 ~ 98268855 (+) |
| LOC110516721 | LOC105012791 | coding | upstream | 756158 | 98187732 ~ 98218285 (+) |
| LOC118937837 | LOC106594247 | coding | upstream | 852365 | 98101643 ~ 98122078 (+) |
| LOC110485325 | LOC105012794 | coding | upstream | 884070 | 98065664 ~ 98090718 (+) |
| LOC110516605 | LOC106592968 | coding | downstream | 1407 | 98976333 ~ 98977246 (+) |
| LOC110539183 | LOC106606365 | coding | downstream | 96070 | 99070996 ~ 99088300 (+) |
| epn3a | LOC105006167 | coding | downstream | 142475 | 99117401 ~ 99175955 (+) |
| LOC110538843 | LOC106601911 | coding | downstream | 208191 | 99183117 ~ 99188055 (+) |
| LOC110538844 | tbcd | coding | downstream | 213959 | 99188885 ~ 99322871 (+) |
| G1132173 | NA | non-coding | upstream | 362 | 98973762 ~ 98974081 (+) |
| G1132172 | NA | non-coding | upstream | 9037 | 98963594 ~ 98965406 (+) |
| G1132166 | NA | non-coding | upstream | 25079 | 98947881 ~ 98949364 (+) |
| G1132153 | NA | non-coding | upstream | 72194 | 98901635 ~ 98902249 (+) |
| G1132119 | NA | non-coding | upstream | 133784 | 98840126 ~ 98840659 (+) |
| G1132087 | NA | non-coding | downstream | 5484 | 98980410 ~ 98981627 (+) |
| G1132188 | NA | non-coding | downstream | 28445 | 99003371 ~ 99004125 (+) |
| G1132192 | NA | non-coding | downstream | 35362 | 99010288 ~ 99012932 (+) |
| G1132196 | NA | non-coding | downstream | 49730 | 99024656 ~ 99024928 (+) |
| G1132093 | NA | other | upstream | 176931 | 98795758 ~ 98797512 (+) |
| G1132082 | NA | other | upstream | 191116 | 98782139 ~ 98783327 (+) |
| G1132058 | NA | other | upstream | 207186 | 98762440 ~ 98767257 (+) |
| G1132060 | NA | other | upstream | 249246 | 98724857 ~ 98725197 (+) |
| G1132187 | NA | other | downstream | 26430 | 99001356 ~ 99001773 (+) |
| LOC110485297 | LOC106592354 | other | downstream | 720646 | 99695572 ~ 99698337 (+) |
