Gene
RNA
| Item | Value |
|---|---|
| gene id | G1132303 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 98979666 ~ 99020309 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288860 | True | 216 | lncRNA | 0.50 | 2 | 98979666 | 99020309 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514497 | LOC106602019 | coding | downstream | 73223 | 98766105 ~ 98906443 (-) |
| LOC110487126 | LOC106602016 | coding | downstream | 408152 | 98566396 ~ 98571514 (-) |
| LOC110485331 | ppl | coding | downstream | 598754 | 98333131 ~ 98380912 (-) |
| LOC110517726 | glyr1 | coding | downstream | 662761 | 98283462 ~ 98316905 (-) |
| LOC110487128 | rogdi | coding | downstream | 696513 | 98265920 ~ 98283153 (-) |
| LOC110538838 | LOC105029615 | coding | upstream | 1649 | 99021958 ~ 99027957 (-) |
| btr02 | LOC106606318 | coding | upstream | 7859 | 99028168 ~ 99040834 (-) |
| LOC110538834 | LOC106601838 | coding | upstream | 21710 | 99042019 ~ 99045620 (-) |
| LOC118937838 | LOC106606233 | coding | upstream | 32975 | 99052890 ~ 99059256 (-) |
| LOC110538840 | LOC106601903 | coding | upstream | 70312 | 99090621 ~ 99092245 (-) |
| G1132305 | NA | non-coding | downstream | 6892 | 98918393 ~ 98972774 (-) |
| G1132321 | NA | non-coding | downstream | 7854 | 98970719 ~ 98971812 (-) |
| G1132317 | NA | non-coding | downstream | 13821 | 98963526 ~ 98965845 (-) |
| G1132315 | NA | non-coding | downstream | 23950 | 98955113 ~ 98955716 (-) |
| G1132293 | NA | non-coding | downstream | 86702 | 98890298 ~ 98892964 (-) |
| G1132339 | NA | non-coding | upstream | 12984 | 99033293 ~ 99033538 (-) |
| G1132342 | NA | non-coding | upstream | 26109 | 99046418 ~ 99047786 (-) |
| G1132340 | NA | non-coding | upstream | 27978 | 99048287 ~ 99051795 (-) |
| G1131863 | NA | other | downstream | 595851 | 98382970 ~ 98383815 (-) |
| LOC118936513 | cog1 | other | downstream | 719979 | 98230363 ~ 98259687 (-) |
| LOC110485313 | LOC106535622 | other | downstream | 1004946 | 97959753 ~ 97974748 (-) |
| G1131666 | NA | other | downstream | 1119148 | 97857599 ~ 97860518 (-) |
| G1131720 | NA | other | downstream | 1126073 | 97852786 ~ 97853593 (-) |
| G1132564 | NA | other | upstream | 145639 | 99165948 ~ 99166607 (-) |
| G1132569 | LOC106606209 | other | upstream | 153356 | 99173665 ~ 99177478 (-) |
| LOC110538845 | LOC106606260 | other | upstream | 161652 | 99178086 ~ 99183106 (-) |
