Gene
RNA
| Item | Value |
|---|---|
| gene id | G1132196 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 99024656 ~ 99024928 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1288693 | True | 231 | lncRNA | 0.33 | 2 | 99024656 | 99024928 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516605 | LOC106592968 | coding | upstream | 47410 | 98976333 ~ 98977246 (+) |
| LOC110487124 | LOC105006040 | coding | upstream | 460417 | 98425760 ~ 98564239 (+) |
| LOC118936514 | smim22 | coding | upstream | 758629 | 98259570 ~ 98268855 (+) |
| LOC110516721 | LOC105012791 | coding | upstream | 806371 | 98187732 ~ 98218285 (+) |
| LOC118937837 | LOC106594247 | coding | upstream | 902578 | 98101643 ~ 98122078 (+) |
| LOC110539183 | LOC106606365 | coding | downstream | 46068 | 99070996 ~ 99088300 (+) |
| epn3a | LOC105006167 | coding | downstream | 92473 | 99117401 ~ 99175955 (+) |
| LOC110538843 | LOC106601911 | coding | downstream | 158189 | 99183117 ~ 99188055 (+) |
| LOC110538844 | tbcd | coding | downstream | 163957 | 99188885 ~ 99322871 (+) |
| LOC110485297 | LOC106592354 | coding | downstream | 670678 | 99695572 ~ 99698337 (+) |
| G1132192 | NA | non-coding | upstream | 11724 | 99010288 ~ 99012932 (+) |
| G1132188 | NA | non-coding | upstream | 20531 | 99003371 ~ 99004125 (+) |
| G1132087 | NA | non-coding | upstream | 43029 | 98980410 ~ 98981627 (+) |
| G1132173 | NA | non-coding | upstream | 50575 | 98973762 ~ 98974081 (+) |
| G1132197 | NA | non-coding | downstream | 108 | 99025036 ~ 99025357 (+) |
| G1132202 | NA | non-coding | downstream | 9195 | 99034123 ~ 99035585 (+) |
| G1132206 | NA | non-coding | downstream | 15908 | 99040836 ~ 99041335 (+) |
| G1132211 | NA | non-coding | downstream | 22981 | 99047909 ~ 99048138 (+) |
| G1132214 | NA | non-coding | downstream | 25048 | 99049976 ~ 99050469 (+) |
| G1132187 | NA | other | upstream | 22883 | 99001356 ~ 99001773 (+) |
| G1132174 | NA | other | upstream | 49730 | 98974443 ~ 98974926 (+) |
| G1132093 | NA | other | upstream | 227144 | 98795758 ~ 98797512 (+) |
| G1132082 | NA | other | upstream | 241329 | 98782139 ~ 98783327 (+) |
| G1132058 | NA | other | upstream | 257399 | 98762440 ~ 98767257 (+) |
| LOC110513175 | LOC106603827 | other | downstream | 780106 | 99805034 ~ 99817184 (+) |
