G1132202


Basic Information

Item Value
gene id G1132202
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 99034123 ~ 99035585 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1288706
gagagataccatcctgtaggacctctctaaccctgtacctggagagataccatcctgtaggacctctctaaccctgtacctggagagataccatcctctaggacctctctaaccctgtacctggagagataccatcctgtaggttttcactacaaccctaatctagcgcacctgattataataattagctggttgataaactgaatcaggttagttataACTGGAGTTGGAGttaggtagctctccaggaacatgcttggagagccctggtgtaggggctaggggtcCATTTGGGATCGGGACTCACTTTGAGGAGCTGCAGGGAGTGTCTGAGTCTGTCAACTTTCTTCAGTCGCTCCTGGATCATCTGGTCAATGTCTACAACCTGTGGCTGCAGAAGAGGATTACACCAAGGTATCATAACATCAAGAGGATTACACCAGGTATCATAACATCAAGAGGATTACACCAAGGTATCACGACACCAAGAGGATTACACCAAGGTATCATGACATCAAGAGGATTACACCAAGGTATCATGACACCAAGAGGATTACACCAAGGTATCATGGCACCAAGAGGATTACACCAAGGTATCATGACACCAATATGATTACACCAAGGTATCATGACATCAAGAGGATTACACCAAGGTATCATGACACCAAGGTATCTATTACAGGTACACCGTAGCGTCTTGAACCTCTTAATGTCACAATATGTTGCACTAAGGTCAGTAGAGTACCGTGTCGTGGCTCTCCTCAGGGCTCTCAGGCCGTGTCTTCCTGTAGTTGTCACAGACGTCAGCCAGGATGCGGTTGATACTAAGGTCTGGCCTGGAATGGAACAACCTCTTGCAGAGGGGACAGTAGTCTGAACGGTGCCGGGTCCAGTAC

Function

NR:

description
E3 ubiquitin-protein ligase TRIM11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1288706 True 896 lncRNA 0.47 4 99034123 99035585

Neighbor

gene id symbol gene type direction distance location
LOC110516605 LOC106592968 coding upstream 56877 98976333 ~ 98977246 (+)
LOC110487124 LOC105006040 coding upstream 469884 98425760 ~ 98564239 (+)
LOC118936514 smim22 coding upstream 768096 98259570 ~ 98268855 (+)
LOC110516721 LOC105012791 coding upstream 815838 98187732 ~ 98218285 (+)
LOC118937837 LOC106594247 coding upstream 912045 98101643 ~ 98122078 (+)
LOC110539183 LOC106606365 coding downstream 35411 99070996 ~ 99088300 (+)
epn3a LOC105006167 coding downstream 81816 99117401 ~ 99175955 (+)
LOC110538843 LOC106601911 coding downstream 147532 99183117 ~ 99188055 (+)
LOC110538844 tbcd coding downstream 153300 99188885 ~ 99322871 (+)
LOC110485297 LOC106592354 coding downstream 660021 99695572 ~ 99698337 (+)
G1132197 NA non-coding upstream 8766 99025036 ~ 99025357 (+)
G1132196 NA non-coding upstream 9195 99024656 ~ 99024928 (+)
G1132192 NA non-coding upstream 21191 99010288 ~ 99012932 (+)
G1132188 NA non-coding upstream 29998 99003371 ~ 99004125 (+)
G1132087 NA non-coding upstream 52496 98980410 ~ 98981627 (+)
G1132206 NA non-coding downstream 5251 99040836 ~ 99041335 (+)
G1132211 NA non-coding downstream 12324 99047909 ~ 99048138 (+)
G1132214 NA non-coding downstream 14391 99049976 ~ 99050469 (+)
G1132351 NA non-coding downstream 28814 99064399 ~ 99064617 (+)
G1132355 NA non-coding downstream 31593 99067178 ~ 99067398 (+)
G1132187 NA other upstream 32350 99001356 ~ 99001773 (+)
G1132174 NA other upstream 59197 98974443 ~ 98974926 (+)
G1132093 NA other upstream 236611 98795758 ~ 98797512 (+)
G1132082 NA other upstream 250796 98782139 ~ 98783327 (+)
G1132058 NA other upstream 266866 98762440 ~ 98767257 (+)
LOC110513175 LOC106603827 other downstream 769449 99805034 ~ 99817184 (+)

Expression


Co-expression Network