Gene
RNA
| Item | Value |
|---|---|
| gene id | G1132961 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 99741531 ~ 99743563 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| NACHT, LRR and PYD domains-containing protein 3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1289767 | True | 669 | lncRNA | 0.40 | 2 | 99741531 | 99743563 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110485298 | LOC106603827 | coding | downstream | 68893 | 99639639 ~ 99672638 (-) |
| LOC118937841 | LOC106606276 | coding | downstream | 110458 | 99563732 ~ 99631073 (-) |
| LOC118937859 | LOC106606280 | coding | downstream | 136873 | 99603751 ~ 99604658 (-) |
| LOC110538877 | atp5h | coding | downstream | 185216 | 99539308 ~ 99556315 (-) |
| LOC110538879 | metrnl | coding | downstream | 360560 | 99351529 ~ 99380971 (-) |
| LOC110539068 | LOC106583735 | coding | upstream | 85867 | 99829430 ~ 100834884 (-) |
| LOC110538873 | NA | coding | upstream | 106593 | 99850156 ~ 99857256 (-) |
| LOC110539071 | LOC106602020 | coding | upstream | 203173 | 99946736 ~ 99965247 (-) |
| LOC118937866 | NA | coding | upstream | 222860 | 99966423 ~ 99968463 (-) |
| LOC110539073 | LOC106606306 | coding | upstream | 226111 | 99969674 ~ 99985905 (-) |
| G1132955 | NA | non-coding | downstream | 17670 | 99722786 ~ 99723861 (-) |
| G1132949 | NA | non-coding | downstream | 34962 | 99705412 ~ 99706569 (-) |
| G1132948 | NA | non-coding | downstream | 36441 | 99704767 ~ 99705090 (-) |
| G1132941 | NA | non-coding | downstream | 47831 | 99693302 ~ 99693700 (-) |
| G1132918 | NA | non-coding | downstream | 80329 | 99616668 ~ 99661202 (-) |
| G1132963 | NA | non-coding | upstream | 1271 | 99744834 ~ 99749856 (-) |
| G1132967 | NA | non-coding | upstream | 9834 | 99753397 ~ 99754187 (-) |
| G1132968 | NA | non-coding | upstream | 10659 | 99754222 ~ 99757713 (-) |
| G1132971 | NA | non-coding | upstream | 20175 | 99763738 ~ 99765603 (-) |
| G1132978 | NA | non-coding | upstream | 46307 | 99789870 ~ 99793262 (-) |
| G1132625 | NA | other | downstream | 414607 | 99326512 ~ 99326924 (-) |
| LOC110538845 | LOC106606260 | other | downstream | 558616 | 99178086 ~ 99183106 (-) |
| G1132569 | LOC106606209 | other | downstream | 565623 | 99173665 ~ 99177478 (-) |
| G1132564 | NA | other | downstream | 574924 | 99165948 ~ 99166607 (-) |
| LOC110538840 | LOC106601903 | other | downstream | 649293 | 99090621 ~ 99092245 (-) |
| G1133028 | NA | other | upstream | 180497 | 99924060 ~ 99925126 (-) |
| G1134054 | NA | other | upstream | 466894 | 100210457 ~ 100211148 (-) |
| LOC118937853 | tmem114 | other | upstream | 515091 | 100258230 ~ 100295591 (-) |
| G1134117 | NA | other | upstream | 677394 | 100420957 ~ 100423066 (-) |
