G1132963


Basic Information

Item Value
gene id G1132963
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 99744834 ~ 99749856 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1289769
tgaacattgacataaaccctctacatacttgagtttctccagtctgcagtgtggatccTTCAGTCTagcagagagcagtctgactcctgagtctcctgggtgattgtagctcagatccagctctctcaggtgtgaggggtttgacctcagagctgagaccagagaagcacagccttcctctgtgactagacagcctgacagcct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1289769 True 204 lncRNA 0.51 2 99744834 99749856

Neighbor

gene id symbol gene type direction distance location
LOC110485298 LOC106603827 coding downstream 72196 99639639 ~ 99672638 (-)
LOC118937841 LOC106606276 coding downstream 113761 99563732 ~ 99631073 (-)
LOC118937859 LOC106606280 coding downstream 140176 99603751 ~ 99604658 (-)
LOC110538877 atp5h coding downstream 188519 99539308 ~ 99556315 (-)
LOC110538879 metrnl coding downstream 363863 99351529 ~ 99380971 (-)
LOC110539068 LOC106583735 coding upstream 79574 99829430 ~ 100834884 (-)
LOC110538873 NA coding upstream 100300 99850156 ~ 99857256 (-)
LOC110539071 LOC106602020 coding upstream 196880 99946736 ~ 99965247 (-)
LOC118937866 NA coding upstream 216567 99966423 ~ 99968463 (-)
LOC110539073 LOC106606306 coding upstream 219818 99969674 ~ 99985905 (-)
G1132961 NA non-coding downstream 1271 99741531 ~ 99743563 (-)
G1132955 NA non-coding downstream 20973 99722786 ~ 99723861 (-)
G1132949 NA non-coding downstream 38265 99705412 ~ 99706569 (-)
G1132948 NA non-coding downstream 39744 99704767 ~ 99705090 (-)
G1132941 NA non-coding downstream 51134 99693302 ~ 99693700 (-)
G1132967 NA non-coding upstream 3541 99753397 ~ 99754187 (-)
G1132968 NA non-coding upstream 4366 99754222 ~ 99757713 (-)
G1132971 NA non-coding upstream 13882 99763738 ~ 99765603 (-)
G1132978 NA non-coding upstream 40014 99789870 ~ 99793262 (-)
G1132898 LOC106574355 non-coding upstream 56753 99806609 ~ 99872529 (-)
G1132625 NA other downstream 417910 99326512 ~ 99326924 (-)
LOC110538845 LOC106606260 other downstream 561919 99178086 ~ 99183106 (-)
G1132569 LOC106606209 other downstream 568926 99173665 ~ 99177478 (-)
G1132564 NA other downstream 578227 99165948 ~ 99166607 (-)
LOC110538840 LOC106601903 other downstream 652596 99090621 ~ 99092245 (-)
G1133028 NA other upstream 174204 99924060 ~ 99925126 (-)
G1134054 NA other upstream 460601 100210457 ~ 100211148 (-)
LOC118937853 tmem114 other upstream 508798 100258230 ~ 100295591 (-)
G1134117 NA other upstream 671101 100420957 ~ 100423066 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G7551 NA non-coding NC_056699.1 CM032068.1 28792644 ~ 28801665 (-)