Gene
RNA
| Item | Value |
|---|---|
| gene id | G1133028 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 99924060 ~ 99925126 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| serine/arginine repetitive matrix protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1289875 | False | 444 | TUCP | 0.45 | 2 | 99924060 | 99925126 |
| TU1289877 | True | 490 | TUCP | 0.44 | 2 | 99924060 | 99924652 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538873 | NA | coding | downstream | 66804 | 99850156 ~ 99857256 (-) |
| LOC110485298 | LOC106603827 | coding | downstream | 251422 | 99639639 ~ 99672638 (-) |
| LOC118937841 | LOC106606276 | coding | downstream | 292987 | 99563732 ~ 99631073 (-) |
| LOC118937859 | LOC106606280 | coding | downstream | 319402 | 99603751 ~ 99604658 (-) |
| LOC110538877 | atp5h | coding | downstream | 367745 | 99539308 ~ 99556315 (-) |
| LOC110539071 | LOC106602020 | coding | upstream | 21610 | 99946736 ~ 99965247 (-) |
| LOC118937866 | NA | coding | upstream | 41297 | 99966423 ~ 99968463 (-) |
| LOC110539073 | LOC106606306 | coding | upstream | 44548 | 99969674 ~ 99985905 (-) |
| LOC118937853 | tmem114 | coding | upstream | 333104 | 100258230 ~ 100295591 (-) |
| carhsp1 | LOC106592621 | coding | upstream | 509125 | 100434251 ~ 100462726 (-) |
| G1133026 | LOC106602045 | non-coding | downstream | 4192 | 99917674 ~ 99919868 (-) |
| G1133012 | NA | non-coding | downstream | 37841 | 99886000 ~ 99886219 (-) |
| G1133009 | NA | non-coding | downstream | 40142 | 99882572 ~ 99883918 (-) |
| G1133008 | NA | non-coding | downstream | 43484 | 99878878 ~ 99880576 (-) |
| G1132898 | LOC106574355 | non-coding | downstream | 51531 | 99806609 ~ 99872529 (-) |
| G1133030 | NA | non-coding | upstream | 5495 | 99930621 ~ 99943583 (-) |
| G1132996 | NA | non-coding | upstream | 50516 | 99975642 ~ 99976958 (-) |
| G1133042 | NA | non-coding | upstream | 64423 | 99989549 ~ 99990363 (-) |
| G1133043 | NA | non-coding | upstream | 66454 | 99991580 ~ 99991845 (-) |
| G1133044 | NA | non-coding | upstream | 69957 | 99995083 ~ 99995357 (-) |
| G1132625 | NA | other | downstream | 597136 | 99326512 ~ 99326924 (-) |
| LOC110538845 | LOC106606260 | other | downstream | 741145 | 99178086 ~ 99183106 (-) |
| G1132569 | LOC106606209 | other | downstream | 748152 | 99173665 ~ 99177478 (-) |
| G1132564 | NA | other | downstream | 757453 | 99165948 ~ 99166607 (-) |
| LOC110538840 | LOC106601903 | other | downstream | 831822 | 99090621 ~ 99092245 (-) |
| G1134054 | NA | other | upstream | 285331 | 100210457 ~ 100211148 (-) |
| G1134117 | NA | other | upstream | 495831 | 100420957 ~ 100423066 (-) |
| G1134183 | NA | other | upstream | 578479 | 100503605 ~ 100504088 (-) |
| eci1 | LOC106596253 | other | upstream | 609724 | 100530184 ~ 100543453 (-) |
