G1133042


Basic Information

Item Value
gene id G1133042
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 99989549 ~ 99990363 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1289893
AGTAAATACTGAGAGGAACTTTCCACcagtataaccagtggtatcagagagagagactttccaccagtataaccagtggtatcagagagagactttccaccagtataaccagtggtatcagagagagagactttccaccagtataaccagtggtatcagagagagagagactttccaccagtataaccagtggtatctgagagagagagactttccacCAGTTTAACCAgtggtatcagagagagagactttccaccagtataaccagtggtatcagagagagagactttccaccagtataaccagtggtatcagagagagagactttccaccagtataaccagtggtatcagagagagagactttccaccagtataaccagtggtatcaGAGAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1289893 True 397 lncRNA 0.44 2 99989549 99990363

Neighbor

gene id symbol gene type direction distance location
LOC110539073 LOC106606306 coding downstream 3644 99969674 ~ 99985905 (-)
LOC118937866 NA coding downstream 21086 99966423 ~ 99968463 (-)
LOC110539071 LOC106602020 coding downstream 24302 99946736 ~ 99965247 (-)
LOC110538873 NA coding downstream 132293 99850156 ~ 99857256 (-)
LOC110485298 LOC106603827 coding downstream 316911 99639639 ~ 99672638 (-)
LOC118937853 tmem114 coding upstream 267867 100258230 ~ 100295591 (-)
carhsp1 LOC106592621 coding upstream 443888 100434251 ~ 100462726 (-)
nat15 natu coding upstream 483191 100473554 ~ 100499497 (-)
LOC118937869 NA coding upstream 500292 100490607 ~ 100491915 (-)
eci1 LOC106596253 coding upstream 539821 100530184 ~ 100543453 (-)
G1132996 NA non-coding downstream 12591 99975642 ~ 99976958 (-)
G1133030 NA non-coding downstream 45966 99930621 ~ 99943583 (-)
G1133026 LOC106602045 non-coding downstream 69681 99917674 ~ 99919868 (-)
G1133012 NA non-coding downstream 103330 99886000 ~ 99886219 (-)
G1133009 NA non-coding downstream 105631 99882572 ~ 99883918 (-)
G1133043 NA non-coding upstream 1217 99991580 ~ 99991845 (-)
G1133044 NA non-coding upstream 4720 99995083 ~ 99995357 (-)
G1133046 NA non-coding upstream 11050 100001413 ~ 100002086 (-)
G1133047 NA non-coding upstream 14989 100005352 ~ 100005569 (-)
G1133054 NA non-coding upstream 35106 100025469 ~ 100025877 (-)
G1133028 NA other downstream 64423 99924060 ~ 99925126 (-)
G1132625 NA other downstream 662625 99326512 ~ 99326924 (-)
LOC110538845 LOC106606260 other downstream 806634 99178086 ~ 99183106 (-)
G1132569 LOC106606209 other downstream 813641 99173665 ~ 99177478 (-)
G1132564 NA other downstream 822942 99165948 ~ 99166607 (-)
G1134054 NA other upstream 220094 100210457 ~ 100211148 (-)
G1134117 NA other upstream 430594 100420957 ~ 100423066 (-)
G1134183 NA other upstream 513242 100503605 ~ 100504088 (-)

Expression


Co-expression Network