G1133046


Basic Information

Item Value
gene id G1133046
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100001413 ~ 100002086 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1289899
ctactactactactactactgctactacctctactactactactactactactactactactactactactgctactactactactactactactactactatagctacAGATGGCAGAATGAAGGATACTGCTGGGGTTTATATCATGGTATCTTTTAAAAGACTGTCCTAGACCCAGATAAGACAAGCAGAGAGGTGGGGAATTGAGAAATGGGACAAGATTGAAGGGTGGCGAGTGAGAcggaacaaattcatatttttccCATGAGATCTGTAGCCTGCAGTATATCAGTCATGGATGTGAATAACAAGAAAGAACATTTAGATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1289899 True 330 lncRNA 0.40 2 100001413 100002086

Neighbor

gene id symbol gene type direction distance location
LOC110539073 LOC106606306 coding downstream 15508 99969674 ~ 99985905 (-)
LOC118937866 NA coding downstream 32950 99966423 ~ 99968463 (-)
LOC110539071 LOC106602020 coding downstream 36166 99946736 ~ 99965247 (-)
LOC110538873 NA coding downstream 144157 99850156 ~ 99857256 (-)
LOC110485298 LOC106603827 coding downstream 328775 99639639 ~ 99672638 (-)
LOC118937853 tmem114 coding upstream 256144 100258230 ~ 100295591 (-)
carhsp1 LOC106592621 coding upstream 432165 100434251 ~ 100462726 (-)
nat15 natu coding upstream 471468 100473554 ~ 100499497 (-)
LOC118937869 NA coding upstream 488569 100490607 ~ 100491915 (-)
eci1 LOC106596253 coding upstream 528098 100530184 ~ 100543453 (-)
G1133044 NA non-coding downstream 6056 99995083 ~ 99995357 (-)
G1133043 NA non-coding downstream 9568 99991580 ~ 99991845 (-)
G1133042 NA non-coding downstream 11050 99989549 ~ 99990363 (-)
G1132996 NA non-coding downstream 24455 99975642 ~ 99976958 (-)
G1133030 NA non-coding downstream 57830 99930621 ~ 99943583 (-)
G1133047 NA non-coding upstream 3266 100005352 ~ 100005569 (-)
G1133054 NA non-coding upstream 23383 100025469 ~ 100025877 (-)
G1133998 NA non-coding upstream 37244 100039330 ~ 100040395 (-)
G1134003 NA non-coding upstream 68481 100070567 ~ 100070873 (-)
G1134045 NA non-coding upstream 185502 100187588 ~ 100189668 (-)
G1133028 NA other downstream 76287 99924060 ~ 99925126 (-)
G1132625 NA other downstream 674489 99326512 ~ 99326924 (-)
LOC110538845 LOC106606260 other downstream 818498 99178086 ~ 99183106 (-)
G1132569 LOC106606209 other downstream 825505 99173665 ~ 99177478 (-)
G1132564 NA other downstream 834806 99165948 ~ 99166607 (-)
G1134054 NA other upstream 208371 100210457 ~ 100211148 (-)
G1134117 NA other upstream 418871 100420957 ~ 100423066 (-)
G1134183 NA other upstream 501519 100503605 ~ 100504088 (-)

Expression


Co-expression Network