G1133054


Basic Information

Item Value
gene id G1133054
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100025469 ~ 100025877 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1289907
gtctgtgttaacagcaggtgttagtccttcccctctggtctatgtggaggagGTTTATTAATTGAACACGGCAAGCAGGAGACAGTGTGAGAGCTACAATAACATTCCTAGAATGTAGAGTTTATCAACACAGGAGACAGTGTGAGAGCTACAATAACATTCCTAGAATGTAGAGTTTATCAACACAGGAGACAGTGTGAGAGCTACAATAACATTCCTAGAATGTAGAGTTTATCAACACAGGAGACAGTGTGAGAGCTACAATAACATTCCTAGAATGTAGAGTTTATCAACACAGGAGACAGTGTGAGAGCTACAATAACATTCCTAGAATGTAGAGTTTATCAACACAGGAGACAGTGTGAGAGCTACAATAACATTCCTAGAATGCAGAGTTTATCAACACAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1289907 True 409 lncRNA 0.40 1 100025469 100025877

Neighbor

gene id symbol gene type direction distance location
LOC110539073 LOC106606306 coding downstream 39564 99969674 ~ 99985905 (-)
LOC118937866 NA coding downstream 57006 99966423 ~ 99968463 (-)
LOC110539071 LOC106602020 coding downstream 60222 99946736 ~ 99965247 (-)
LOC110538873 NA coding downstream 168213 99850156 ~ 99857256 (-)
LOC110485298 LOC106603827 coding downstream 352831 99639639 ~ 99672638 (-)
LOC118937853 tmem114 coding upstream 232353 100258230 ~ 100295591 (-)
carhsp1 LOC106592621 coding upstream 408374 100434251 ~ 100462726 (-)
nat15 natu coding upstream 447677 100473554 ~ 100499497 (-)
LOC118937869 NA coding upstream 464778 100490607 ~ 100491915 (-)
eci1 LOC106596253 coding upstream 504307 100530184 ~ 100543453 (-)
G1133047 NA non-coding downstream 19900 100005352 ~ 100005569 (-)
G1133046 NA non-coding downstream 23383 100001413 ~ 100002086 (-)
G1133044 NA non-coding downstream 30112 99995083 ~ 99995357 (-)
G1133043 NA non-coding downstream 33624 99991580 ~ 99991845 (-)
G1133042 NA non-coding downstream 35106 99989549 ~ 99990363 (-)
G1133998 NA non-coding upstream 13453 100039330 ~ 100040395 (-)
G1134003 NA non-coding upstream 44690 100070567 ~ 100070873 (-)
G1134045 NA non-coding upstream 161711 100187588 ~ 100189668 (-)
G1134048 NA non-coding upstream 168384 100194261 ~ 100196221 (-)
G1134050 NA non-coding upstream 171081 100196958 ~ 100197982 (-)
G1133028 NA other downstream 100343 99924060 ~ 99925126 (-)
G1132625 NA other downstream 698545 99326512 ~ 99326924 (-)
LOC110538845 LOC106606260 other downstream 842554 99178086 ~ 99183106 (-)
G1132569 LOC106606209 other downstream 849561 99173665 ~ 99177478 (-)
G1132564 NA other downstream 858862 99165948 ~ 99166607 (-)
G1134054 NA other upstream 184580 100210457 ~ 100211148 (-)
G1134117 NA other upstream 395080 100420957 ~ 100423066 (-)
G1134183 NA other upstream 477728 100503605 ~ 100504088 (-)

Expression


Co-expression Network