G1134054


Basic Information

Item Value
gene id G1134054
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100210457 ~ 100211148 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1291316
gttttatggacgagacctgggctcgggaacatgacattcctctcagacagttaagggagtccacggccttgttcgccctggatggtagtcctctccccaggattcagcgtgagacgctacctttaaccctcactgtctctggtaatcatagcgaaaccatttcttttttaatttttcgttcaccttttacacctgttgttttgggccatccctggctagtttgtcataatccttctattaattggtctagtaattctatcctctcctggaacgtctcttgtcatgtgaaatgtttaatgtctgctatccctcctgtttcctctatctcttcttcacaggaggagcctggtgatttgacaggggtgccggaggaatatcacgatctgcgcacggtgttcagtcggtccagggccacctctcttcctccacaccggtcgtatgattgtagtattgatctccttccgggaaccactcccccccggggtagactatactctctgttggctcccgaacgtaaggctctcgaagattatttgtctgtagctcttgccgccggtaccatagtcccctcctcctctcccgccggagcggggtttttttttgttaagaagaaggacgggtccctgcgcccctgcatagattatcgagggctgaatgacataacagtgaagaatcgttatccgcttcctctt

Function

NR:

description
Retrotransposable element Tf2 protein type 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1291316 True 692 TUCP 0.50 1 100210457 100211148

Neighbor

gene id symbol gene type direction distance location
LOC110539073 LOC106606306 coding downstream 224552 99969674 ~ 99985905 (-)
LOC118937866 NA coding downstream 241994 99966423 ~ 99968463 (-)
LOC110539071 LOC106602020 coding downstream 245210 99946736 ~ 99965247 (-)
LOC110538873 NA coding downstream 353201 99850156 ~ 99857256 (-)
LOC110485298 LOC106603827 coding downstream 537819 99639639 ~ 99672638 (-)
LOC118937853 tmem114 coding upstream 47082 100258230 ~ 100295591 (-)
carhsp1 LOC106592621 coding upstream 223103 100434251 ~ 100462726 (-)
nat15 natu coding upstream 262406 100473554 ~ 100499497 (-)
LOC118937869 NA coding upstream 279507 100490607 ~ 100491915 (-)
eci1 LOC106596253 coding upstream 319036 100530184 ~ 100543453 (-)
G1134052 NA non-coding downstream 4723 100205326 ~ 100205734 (-)
G1134050 NA non-coding downstream 12475 100196958 ~ 100197982 (-)
G1134048 NA non-coding downstream 14236 100194261 ~ 100196221 (-)
G1134045 NA non-coding downstream 20789 100187588 ~ 100189668 (-)
G1134003 NA non-coding downstream 139584 100070567 ~ 100070873 (-)
G1134072 NA non-coding upstream 37154 100248302 ~ 100252231 (-)
G1134073 NA non-coding upstream 37593 100248741 ~ 100252743 (-)
G1134106 mettl22 non-coding upstream 107488 100318636 ~ 100330277 (-)
G1134110 NA non-coding upstream 115275 100326423 ~ 100328120 (-)
G1134129 NA non-coding upstream 116384 100327532 ~ 100328040 (-)
G1133028 NA other downstream 285331 99924060 ~ 99925126 (-)
G1132625 NA other downstream 883533 99326512 ~ 99326924 (-)
LOC110538845 LOC106606260 other downstream 1027542 99178086 ~ 99183106 (-)
G1132569 LOC106606209 other downstream 1034549 99173665 ~ 99177478 (-)
G1132564 NA other downstream 1043850 99165948 ~ 99166607 (-)
G1134117 NA other upstream 209809 100420957 ~ 100423066 (-)
G1134183 NA other upstream 292457 100503605 ~ 100504088 (-)
LOC118937858 LOC106591175 other upstream 417295 100628440 ~ 100651699 (-)

Expression


Co-expression Network