G1134135


Basic Information

Item Value
gene id G1134135
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100345758 ~ 100346436 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1291450
ttaggatatagtactagaaacattcTGTTGGATAGAGGTTTTCTAGGTTCAGTAAAGTGTGTATATgaaactgtctgtctctcaccagTTGCTCTATGCGCTCATACAGCAGACACTGTGGGAAAGAGGGTGTGACCTGCTCCACTGTGAAGCATGTCCGTCCGTCCCTCAGCTCCTGCATCTCACACAGACAGTGGCGGAAATGGTCGTAGGCCTCACAGGATATGTCCATGTGTCTCAGAGTGAAGTTCAGCCTGGGGAAcgaacacgcacacacgcacacacaaacaaagactGTAATTACAAGATGTGGCACATGAGCtggatttattttttacatttagcatAAATCTATATatacaagaacctgatggtcactctaacagagctccagagttcctctgtggagatgggagaaacttccagaaggacaaccatctctgcagcactccaggcctttatggtcagacagaagccactcctcaggaaaaggcacatgacacccCGCTAGGAGTTTGTcaagaggcacctaaagactctcagaccatgagaaacaagattctctggtctgatgaagccaagattgaactctttggcctgaatgacaagcatcacgtctggaggaaacctggcatcatccctacagtgaagcatggtggtggcaacatcctGATGTGcc

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1291450 True 679 lncRNA 0.47 1 100345758 100346436

Neighbor

gene id symbol gene type direction distance location
LOC118937853 tmem114 coding downstream 50167 100258230 ~ 100295591 (-)
LOC110539073 LOC106606306 coding downstream 359853 99969674 ~ 99985905 (-)
LOC118937866 NA coding downstream 377295 99966423 ~ 99968463 (-)
LOC110539071 LOC106602020 coding downstream 380511 99946736 ~ 99965247 (-)
LOC110538873 NA coding downstream 488502 99850156 ~ 99857256 (-)
carhsp1 LOC106592621 coding upstream 87815 100434251 ~ 100462726 (-)
nat15 natu coding upstream 127118 100473554 ~ 100499497 (-)
LOC118937869 NA coding upstream 144219 100490607 ~ 100491915 (-)
eci1 LOC106596253 coding upstream 183748 100530184 ~ 100543453 (-)
c12h16orf72 LOC106606270 coding upstream 202751 100549187 ~ 100558850 (-)
G1134133 NA non-coding downstream 90 100343683 ~ 100345668 (-)
G1134106 mettl22 non-coding downstream 15481 100318636 ~ 100330277 (-)
G1134110 NA non-coding downstream 17638 100326423 ~ 100328120 (-)
G1134129 NA non-coding downstream 17718 100327532 ~ 100328040 (-)
G1134073 NA non-coding downstream 93015 100248741 ~ 100252743 (-)
G1134136 NA non-coding upstream 1143 100347579 ~ 100347805 (-)
G1134137 NA non-coding upstream 2348 100348784 ~ 100349294 (-)
G1134138 NA non-coding upstream 5271 100351707 ~ 100353340 (-)
G1134139 NA non-coding upstream 7059 100353495 ~ 100353702 (-)
G1134142 NA non-coding upstream 13034 100359470 ~ 100359992 (-)
G1134054 NA other downstream 134610 100210457 ~ 100211148 (-)
G1133028 NA other downstream 420632 99924060 ~ 99925126 (-)
G1132625 NA other downstream 1018834 99326512 ~ 99326924 (-)
LOC110538845 LOC106606260 other downstream 1162843 99178086 ~ 99183106 (-)
G1134117 NA other upstream 74521 100420957 ~ 100423066 (-)
G1134183 NA other upstream 157169 100503605 ~ 100504088 (-)
LOC118937858 LOC106591175 other upstream 282007 100628440 ~ 100651699 (-)
LOC118937873 LOC106603827 other upstream 470836 100816544 ~ 100821913 (-)

Expression


Co-expression Network