G1134147



Basic Information


Item Value
gene id G1134147
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100365687 ~ 100369704 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1291468
GGTTGTATAAACTGaataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtttaaactgtataaatccccaggttgtataaactgtataaatccccaggtggtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggtggtataaactgtataaatctccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtatTAACTGTATAAATCCTATCAGGTTGTATAAACTGAATAAATCAccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaat
>TU1291470
gtataaaTCCTATcagGTTGTATAAACTGaataaatccccaggttgtataaactgtataaatccccaggtggtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggtggtataaactgtataaatctccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtatTAACTGTATAAATCCTATCAGGTTGTATAAACTGAATAAATCAccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaat
>TU1291471
tataaactgtataaatccccaggttgtatgaactgtataaatccccaggtggtataaactgtataaatctccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtatTAACTGTATAAATCCTATCAGGTTGTATAAACTGAATAAATCAccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaat
>TU1291472
aaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtattaactgtataaatccccaggttgtattaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaat
>TU1291469
aaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtattaactgtataaatccccaggttgtataaactgtataaatccccaggttgtattaactgtataaatccccaggtggtataaactgtataaatccccaggttatataaactgtataaatccccaggtggtataaactgtataaatccccaggttgtataaactgtataaatccccaggttgtataaactgtataaatccccaggtt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1291468 False 439 lncRNA 0.34 5 100365687 100368361
TU1291470 False 376 lncRNA 0.33 5 100365687 100368848
TU1291471 False 278 lncRNA 0.33 5 100365687 100369704
TU1291472 False 238 lncRNA 0.34 2 100365687 100367041
TU1291469 True 299 lncRNA 0.35 2 100365938 100367041

Neighbor


gene id symbol gene type direction distance location
LOC118937853 tmem114 coding downstream 70096 100258230 ~ 100295591 (-)
LOC110539073 LOC106606306 coding downstream 379782 99969674 ~ 99985905 (-)
LOC118937866 NA coding downstream 397224 99966423 ~ 99968463 (-)
LOC110539071 LOC106602020 coding downstream 400440 99946736 ~ 99965247 (-)
LOC110538873 NA coding downstream 508431 99850156 ~ 99857256 (-)
carhsp1 LOC106592621 coding upstream 64547 100434251 ~ 100462726 (-)
nat15 natu coding upstream 103850 100473554 ~ 100499497 (-)
LOC118937869 NA coding upstream 120951 100490607 ~ 100491915 (-)
eci1 LOC106596253 coding upstream 160480 100530184 ~ 100543453 (-)
c12h16orf72 LOC106606270 coding upstream 179483 100549187 ~ 100558850 (-)
G1134142 NA non-coding downstream 5695 100359470 ~ 100359992 (-)
G1134139 NA non-coding downstream 11985 100353495 ~ 100353702 (-)
G1134138 NA non-coding downstream 12347 100351707 ~ 100353340 (-)
G1134137 NA non-coding downstream 16393 100348784 ~ 100349294 (-)
G1134136 NA non-coding downstream 17882 100347579 ~ 100347805 (-)
G1134151 NA non-coding upstream 9447 100379151 ~ 100379754 (-)
G1134117 NA non-coding upstream 51253 100420957 ~ 100423066 (-)
G1134165 NA non-coding upstream 71691 100441395 ~ 100441822 (-)
G1134116 NA non-coding upstream 97788 100467492 ~ 100470548 (-)
G1134115 NA non-coding upstream 100934 100470638 ~ 100472124 (-)
G1134054 NA other downstream 154539 100210457 ~ 100211148 (-)
G1133028 NA other downstream 440561 99924060 ~ 99925126 (-)
G1132625 NA other downstream 1038763 99326512 ~ 99326924 (-)
LOC110538845 LOC106606260 other downstream 1182772 99178086 ~ 99183106 (-)
G1134183 NA other upstream 133901 100503605 ~ 100504088 (-)
LOC118937858 LOC106591175 other upstream 258739 100628440 ~ 100651699 (-)
LOC118937873 LOC106603827 other upstream 447568 100816544 ~ 100821913 (-)

Expression



Co-expression Network