G1134151


Basic Information

Item Value
gene id G1134151
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100379151 ~ 100379754 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1291476
atccattttagaataaggctgtaacgtaacaaaatgtggaaaaagtcaaggggtctgaatactttacgaatgcactgtatatacacacacttttaaaaaaaaaacaataactgCCCTATCTGTCCTAGACCTCATCATAACTAAACACATGAGGACCTCATCATAACTAAACACATGAGGACAAGGTCATCAATAACTGCCTTATCTGTcctagacctcatcatgactaAACACATGAGGACAAGGTCATCATTAACTGCCTTATCTGTcctagacctcatcatgactaAACACATGAGGACAAGGTCATCATTAACTGCCTTATCTGTCCTAGACCTCATCATAACTAAACACATGAGGACCTCATCATAACTAAACACATGAGGACCTCATCATAA
>TU1291478
atccattttagaataaggctgtaacgtaacaaaatgtggaaaaagtcaaggggtctgaatactttacgaatgcactgtatatacacacacttttaaaaaaaaaacaataactgCCCTATCTGTCCTAGACCTCATCATAACTAAACACATGAGGACCTCATCATAACTAAACACATGAGGACAAGGTCATCATTAACTGCCTTATCTGTCCTAGACCTCATCATAACTAAACACATGAGGACCTCATCATAACTAAACACATGAGGACCTCATCATAA
>TU1291479
atccattttagaataaggctgtaacgtaacaaaatgtggaaaaagtcaaggggtctgaatactttacgaatgcactgtatatacacacacttttaaaaaaaaaacaataactgCCCTATCTGTCCTAGACCTCATCATAACTAAACACATGAGGACCTCATCATAACTAAACACATGAGGACAAGGTCATCAATAACTGCCTTATCTGTcctagacctcatcatgactaAACACATGAGGACAAGGTCATCATTAACTGCCTTATCTGTcctagacctcatcatgactaAACACATGAGGACAAGGTCATCATTAACTGCCTTATCTGTCCTAGACCTCATCATAACTAAACACATGGGGACAAGGTCATCATTAACTGCCTTATCTGTcctagacctcatcatgactaAACACATGAGGACCTCATCATGACTAAACACATGAGGACAAGGTCATCATTAACTGCCTTATCTGTCCTAGACCTCATCATAACTAAACACATGAGGACCTCATCATAACTAAACACATGAGGACCTCATCATAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1291476 False 398 lncRNA 0.38 2 100379151 100379754
TU1291478 False 278 lncRNA 0.36 2 100379151 100379754
TU1291479 True 544 lncRNA 0.39 2 100379151 100379754

Neighbor

gene id symbol gene type direction distance location
LOC118937853 tmem114 coding downstream 83560 100258230 ~ 100295591 (-)
LOC110539073 LOC106606306 coding downstream 393246 99969674 ~ 99985905 (-)
LOC118937866 NA coding downstream 410688 99966423 ~ 99968463 (-)
LOC110539071 LOC106602020 coding downstream 413904 99946736 ~ 99965247 (-)
LOC110538873 NA coding downstream 521895 99850156 ~ 99857256 (-)
carhsp1 LOC106592621 coding upstream 54497 100434251 ~ 100462726 (-)
nat15 natu coding upstream 93800 100473554 ~ 100499497 (-)
LOC118937869 NA coding upstream 110901 100490607 ~ 100491915 (-)
eci1 LOC106596253 coding upstream 150430 100530184 ~ 100543453 (-)
c12h16orf72 LOC106606270 coding upstream 169433 100549187 ~ 100558850 (-)
G1134147 NA non-coding downstream 9447 100365687 ~ 100369704 (-)
G1134148 NA non-coding downstream 11731 100366366 ~ 100367420 (-)
G1134142 NA non-coding downstream 19159 100359470 ~ 100359992 (-)
G1134139 NA non-coding downstream 25449 100353495 ~ 100353702 (-)
G1134138 NA non-coding downstream 25811 100351707 ~ 100353340 (-)
G1134117 NA non-coding upstream 41203 100420957 ~ 100423066 (-)
G1134165 NA non-coding upstream 61641 100441395 ~ 100441822 (-)
G1134116 NA non-coding upstream 87738 100467492 ~ 100470548 (-)
G1134115 NA non-coding upstream 90884 100470638 ~ 100472124 (-)
G1134054 NA other downstream 168003 100210457 ~ 100211148 (-)
G1133028 NA other downstream 454025 99924060 ~ 99925126 (-)
G1132625 NA other downstream 1052227 99326512 ~ 99326924 (-)
LOC110538845 LOC106606260 other downstream 1196236 99178086 ~ 99183106 (-)
G1134183 NA other upstream 123851 100503605 ~ 100504088 (-)
LOC118937858 LOC106591175 other upstream 248689 100628440 ~ 100651699 (-)
LOC118937873 LOC106603827 other upstream 437518 100816544 ~ 100821913 (-)

Expression


Co-expression Network