G1134115


Basic Information

Item Value
gene id G1134115
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100470638 ~ 100472124 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1291419
TACTGTCAGTAGCTGCCCTCCACTCTACTGTCAGTAGCTGCCCTCCACTCTACTGTCTgagccagtggtgtagtggagggtcaACACATGTAGACTCCGGTCACTCTGAATTGAAATATAGGGATTGAATGTTACCTTTTTCACTGGAATGGTGTGGACTGGGTTACGATTCAGTAGGATTGGGATCGACTCTGGGTTCAACTGGACCGGGGTTACGATTCAGTAGGATTGGGATCGACTCTGGGTTCAACTGGACTGGGTTACGATTCAGTAGGATTGGGATCGACTCTGGTTTCAACTGGACTGGGTTACGATTCAGTAGGATTGGGATCAACTCTGGGTTCAACTGGACCGGGGTTATGATTCAGTAGGCTTGGGGTCAACTCTGTTTTCAGTTCAGACAATTTGAAATGCTCCTTGTCAATAGTCAGAATCCACATAGAAAAAATAATTTGTTATTTCAATACAATCATTGAAATCCTGAATCCTGAGTTGAGGTCAGCGCTCACACTTTCACACAAATCTTCCATTGACATCAACGTATGATCTACACAGAAGTCTACTTTTTAAGTGTGCACAGAGATCTCAAGGACTAGGATTCCTCCCAGACTGACTTTCGGTTCACTTTGGGTCCGATTCAGACTTGAGATGAGTAGACTCACAGTaaatcatttgtttttgttttactgaCGTCCACGTTTAGTAAAACTCAAGTCTGAATTGTGACCTTCCTGACCTAATTTTGATCTGAAATGGGTTTTGACCCGaaaaccctgctgtctgtctgtctgtccccttcaGGGCTGTCTGTCATTCTGCTGCTCACGTAGACAACCAGACAGTCTGGTTTTAATCCAGATGTTTAACATAGCTGACATTTAGTTTTGTATGTCTGCCTGTTTCTATTAAGAGATTAAAAAATATAACATGGTAGAAGTTGCTCTCTCTGTGAGATTCCCCCAATAACacaaatatatatgtgtgtgtgtgggtgtagtgtgtgtctagtcaaatgtagtgcactatatagggaatagggtgctatttgggactcaaCCGAGGTGTAGTTAAGACCGTTTCTAGATAATGTTTTAAAGAGGAGCACTGTGTTGTTTAGGGTTACAGAATTCCTCTATCTTTCCCAACACTCCCAAAGTTTTACAGAAGTCCTCTATCTTTCCCAACACTCCCAAAGTTTT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1291419 True 1199 lncRNA 0.43 2 100470638 100472124

Neighbor

gene id symbol gene type direction distance location
carhsp1 LOC106592621 coding downstream 7912 100434251 ~ 100462726 (-)
LOC118937853 tmem114 coding downstream 175047 100258230 ~ 100295591 (-)
LOC110539073 LOC106606306 coding downstream 484733 99969674 ~ 99985905 (-)
LOC118937866 NA coding downstream 502175 99966423 ~ 99968463 (-)
LOC110539071 LOC106602020 coding downstream 505391 99946736 ~ 99965247 (-)
nat15 natu coding upstream 1430 100473554 ~ 100499497 (-)
LOC118937869 NA coding upstream 18531 100490607 ~ 100491915 (-)
eci1 LOC106596253 coding upstream 58060 100530184 ~ 100543453 (-)
c12h16orf72 LOC106606270 coding upstream 77063 100549187 ~ 100558850 (-)
LOC118937871 NA coding upstream 152046 100623875 ~ 100625726 (-)
G1134116 NA non-coding downstream 90 100467492 ~ 100470548 (-)
G1134165 NA non-coding downstream 28816 100441395 ~ 100441822 (-)
G1134117 NA non-coding downstream 47572 100420957 ~ 100423066 (-)
G1134151 NA non-coding downstream 90884 100379151 ~ 100379754 (-)
G1134147 NA non-coding downstream 100934 100365687 ~ 100369704 (-)
G1134179 NA non-coding upstream 24469 100496593 ~ 100496906 (-)
G1134180 NA non-coding upstream 28041 100500165 ~ 100500664 (-)
G1134181 NA non-coding upstream 28597 100500721 ~ 100501020 (-)
G1134182 NA non-coding upstream 30075 100502199 ~ 100502548 (-)
G1134054 NA other downstream 259490 100210457 ~ 100211148 (-)
G1133028 NA other downstream 545512 99924060 ~ 99925126 (-)
G1132625 NA other downstream 1143714 99326512 ~ 99326924 (-)
G1134183 NA other upstream 31481 100503605 ~ 100504088 (-)
LOC118937858 LOC106591175 other upstream 156319 100628440 ~ 100651699 (-)
LOC118937873 LOC106603827 other upstream 345148 100816544 ~ 100821913 (-)
G1134316 LOC106603753 other upstream 355052 100827176 ~ 100828092 (-)

Expression


Co-expression Network