G1134112


Basic Information

Item Value
gene id G1134112
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100546791 ~ 100549123 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1291397
AACCGAGGGCTGTGGAAAACGTTACTCAGTGAACTAGATAAGGATTGATGCCAGAAGTGGTTCTGTTGGAGAGATGCCTTCTTTGCTAGAACCTATTGCTTTGTGTTAGTCATCCTGCTCAGTGGACATTGATGCTGTCtgtgatgatgaagaggaggacttCCCTCACTTGACATTTcctgactgtgtcccaaatggcaccctagtccctacatcATAGCCCCTACACACCACCCTAGTCCCTACACAGCACCCTAGTCCCTACATCATAGCCCCTACACACCACCCTAGTCCCTACACAGCACCATAGTTCCTACATCATAGCCCCTACATCCTAGTCCCTACACagcaccctagtccctacaccCTAGTCTCTACACagcaccctagtccctacatcATAGCCCTTACATCCAAGTCCCTACACagcaccctagtccctacatcCTAGTCCCTACACAGCACCATAGTCCCTACATCATAGCCCCTACACCCTAGTCTCTACACAGCACCCTAGTCTCTACACAGCACCATAGTCCCTACATCATAGCCCCTACACCCTAGTCTCTacacagcaccctattccctacaccctAGTCTCTACACagcaccctagtccctacatcATAGCCCCTACACCCTAGTCTCTACACagcaccctagtccctacaccCTAGTCTCTACACagcaccctagtccctacatcCTAGTCCCTACACACCACCCTAGTCCCTACACACCACCCTAGTCCCTACATGGCACCCTACTATATTACAGCATAGGGCCCTTTTTGAAAAGTGTTGCACTATACAGGGTGTTGTTTGGGAGCAGCCCTGCTGTCTCCTGTGTCTAGTTGTGATGGCTGAGGGGGCTGTGGCGTCTCAGGGCTGATTCTCCCAATAGCAGGCTGTTGATATTTGATTGTATCGGCTTCCTTTCTGTCTTTGACAACTGTGCTTCAGCAGTCCATGTTAGTGCAACCAACCCGCAAGGGTCAGCGTCCCAAAATCACACCCTATCTATtccctaatatatatataaagtgaaCTACTTTTGCCTACAGGTCTCTCTGGTCGAAGTAGTCCACTATGTAGGGACATAAGGATGCTGTTTGCTCCACGAACCCCAGTGTTCAGGTTCGTATACCTCCCCTGCAGTTGGTTCATTTATACACCGCCTGGCTTCTTCTGTTGAGGTGTATATTTCAAAGTTCAGGAATTATCCGTGTTACTTAATGCTGGGATGATATCTGACCTGTCGCCAGACTAACCCTCCAGTCAGGTGATGtcgtgtgtgggggggggaccCTAATAGGAAGGTAAACTATGATCACCGTTCACAGTGAGTAAATGTGATGCTCCCTTAaactttcaatacattttttttttttatgtaaaagaTGGGACGGGGTAAACTCTCCTGCAAAATAACCTGTGTTTCTACTCCACTACACCTCTGTCCCCTTCTGAGTATGTTGATGTTTTCGGACTATTCTGttcagtgtggttgtgtgttcaCCATATTACCTGAGTTGgaataatgatatatatatattttttgcacttAAGCCTCTTTCACATCTAAACTCATGTTGATCTTCCCACCGGAACCAACCAGGCAGTTCATCCTCCACCTAAAGGTCTTCAATCAGACACCACCACCTTCACCTCCCTctggaactggggggggggggggggttcacctgCCACCAAACAGaaacaaactgaaatgttttGCTACTCTGTGCCGTAATGAACATGCCCCCAAACCAGAAGAGAAAGACTGAAATGTTTTGCTACTCTGTGCCGTAATGAACATGCCCCAAACCAGAAGAGAAAGACTGAAATGTTTTTGCTACGTTGTGCTGTAATGAACATGCCCCAAAACCAGAAGAGAAagtcctgtttttgtttttgaggTTTTTTttcgttgcaaaatgttttgctatgcTGTGCCATACTGAACACCACCCAGAGTAAGAGATGTGGGAGGAGCTAAAGTGGAGGCCCCAGAAACAAACTGACAGAATAGTTCTTTTCGTGagcgaggagggggggggggggggtctaacaTCCCAATGTCCACACTACTGTTTAGTATGCCGTATGAATGGCCGATCCAGTGCATCGCTCCATACTAAGTGATATTGTGACGTAGTCTGTCTTCTAATGGGTGTTCATTATTGACTTGTGTTGATGTGAAAAGATGCAGTTGCCTGACTATTAAAGCTGAAAGGGATAGTTTACCTGAATTATTAGAAAA
>TU1291398
AACCGAGGGCTGTGGAAAACGTTACTCAGTGAACTAGATAAGGATTGATGCCAGAAGTGGTTCTGTTGGAGAGATGCCTTCTTTGCTAGAACCTATTGCTTTGTGTTAGTCATCCTGCTCAGTGGACATTGATGCTGTCtgtgatgatgaagaggaggacttCCCTCACTTGACATTTcctgactgtgtcccaaatggcaccctagtccctacatcATAGCCCCTACACACCACCCTAGTCCCTACACAGCACCCTAGTCCCTACATCATAGCCCCTACACACCACCCTAGTCCCTACACAGCACCATAGTTCCTACATCATAGCCCCTACATCCTAGTCCCTACACagcaccctagtccctacaccCTAGTCTCTACACagcaccctagtccctacatcATAGCCCTTACATCCAAGTCCCTACACagcaccctagtccctacatcCTAGTCCCTACACAGCACCATAGTCCCTACATCATAGCCCCTACACCCTAGTCTCTacacagcaccctattccctacaccctAGTCTCTACACagcaccctagtccctacatcATAGCCCCTACACCCTAGTCTCTACACagcaccctagtccctacaccCTAGTCTCTACACagcaccctagtccctacatcCTAGTCCCTACACACCACCCTAGTCCCTACACACCACCCTAGTCCCTACATGGCACCCTACTATATTACAGCATAGGGCCCTTTTTGAAAAGTGTTGCACTATACAGGGTGTTGTTTGGGAGCAGCCCTGCTGTCTCCTGTGTCTAGTTGTGATGGCTGAGGGGGCTGTGGCGTCTCAGGGCTGATTCTCCCAATAGCAGGCTGTTGATATTTGATTGTATCGGCTTCCTTTCTGTCTTTGACAACTGTGCTTCAGCAGTCCATGTTAGTGCAACCAACCCGCAAGGGTCAGCGTCCCAAAATCACACCCTATCTATtccctaatatatatataaagtgaaCTACTTTTGCCTACAGGTCTCTCTGGTCGAAGTAGTCCACTATGTAGGGACATAAGGATGCTGTTTGCTCCACGAACCCCAGTGTTCAGGTTCGTATACCTCCCCTGCAGTTGGTTCATTTATACACCGCCTGGCTTCTTCTGTTGAGGTGTATATTTCAAAGTTCAGGAATTATCCGTGTTACTTAATGCTGGGATGATATCTGACCTGTCGCCAGACTAACCCTCCAGTCAGGTGATGtcgtgtgtgggggggggaccCTAATAGGAAGGTAAACTATGATCACCGTTCACAGTGAGTAAATGTGATGCTCCCTTAaactttcaatacattttttttttttatgtaaaagaTGGGACGGGGTAAACTCTCCTGCAAAATAACCTGTGTTTCTACTCCACTACACCTCTGTCCCCTTCTGAGTATGTTGATGTTTTCGGACTATTCTGttcagtgtggttgtgtgttcaCCATATTACCTGAGTTGgaataatgatatatatatattttttgcacttAAGCCTCTTTCACATCTAAACTCATGTTGATCTTCCCACCGGAACCAACCAGGCAGTTCATCCTCCACCTAAAGGTCTTCAATCAGACACCACCACCTTCACCTCCCTctggaactggggggggggggggggttcacctgCCACCAAACAGaaacaaactgaaatgttttGCTACTCTGTGCCGTAATGAACATGCCCCCAAACCAGAAGAGAAAGACTGAAATGTTTTGCTACTCTGTGCCGTAATGAACATGCCCCAAACCAGAAGAGAAAGACTGAAATGTTTTTGCTACGTTGTGCTGTAATGAACATGCCCCAAAACCAGAAGAGAAagtcctgtttttgtttttgaggTTTTTTttcgttgcaaaatgttttgctatgcTGTGCCATACTGAACACCACCCAGAGTAAGAGATGTGGGAGGAGCTAAAGTGGAGGCCCCAGAAACAAACTGACAGAATAGTTCTTTTCGTGagcgaggagggggggggggggggtctaacaTCCCAATGTCCACACTACTGTTTAGTATGCCGTATGAATGGCCGATCCAGTGCATCGCTCCATACTAAGTGATATTGTGACGTAGTCTGTCTTCTAATGGGTGTTCATTATTGACTTGTGTTGATGTGAAAAGATGCAGTTGCCTGACTATTAAAGCTGAAAGGGATAGTTTACCTGAATTATTAGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1291397 False 2262 lncRNA 0.47 2 100546791 100549123
TU1291398 True 2196 lncRNA 0.47 3 100546791 100549123

Neighbor

gene id symbol gene type direction distance location
eci1 LOC106596253 coding downstream 3338 100530184 ~ 100543453 (-)
nat15 natu coding downstream 47294 100473554 ~ 100499497 (-)
LOC118937869 NA coding downstream 54876 100490607 ~ 100491915 (-)
carhsp1 LOC106592621 coding downstream 84065 100434251 ~ 100462726 (-)
LOC118937853 tmem114 coding downstream 251200 100258230 ~ 100295591 (-)
c12h16orf72 LOC106606270 coding upstream 64 100549187 ~ 100558850 (-)
LOC118937871 NA coding upstream 75047 100623875 ~ 100625726 (-)
LOC118937858 LOC106591175 coding upstream 79317 100628440 ~ 100651699 (-)
LOC118937873 LOC106603827 coding upstream 267421 100816544 ~ 100821913 (-)
LOC110518098 LOC106581592 coding upstream 393051 100942033 ~ 101130515 (-)
G1134198 NA non-coding downstream 243 100545885 ~ 100546548 (-)
G1134197 NA non-coding downstream 1894 100544655 ~ 100544897 (-)
G1134196 NA non-coding downstream 2910 100543600 ~ 100543881 (-)
G1134194 NA non-coding downstream 17002 100529049 ~ 100529789 (-)
G1134191 NA non-coding downstream 23622 100521603 ~ 100523169 (-)
G1134204 NA non-coding upstream 19876 100568999 ~ 100570070 (-)
G1134206 NA non-coding upstream 23395 100572518 ~ 100573364 (-)
G1134219 NA non-coding upstream 69539 100618662 ~ 100619505 (-)
G1134223 NA non-coding upstream 91119 100640242 ~ 100640758 (-)
G1134183 NA other downstream 42703 100503605 ~ 100504088 (-)
G1134117 NA other downstream 123725 100420957 ~ 100423066 (-)
G1134054 NA other downstream 335643 100210457 ~ 100211148 (-)
G1134316 LOC106603753 other upstream 278053 100827176 ~ 100828092 (-)
G1134339 LOC106603894 other upstream 391282 100940405 ~ 100941907 (-)

Expression


Co-expression Network