Gene
RNA
| Item | Value |
|---|---|
| gene id | G1134223 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 100640242 ~ 100640758 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: basic salivary proline-rich protein 1-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1291568 | True | 373 | lncRNA | 0.52 | 2 | 100640242 | 100640758 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937871 | NA | coding | downstream | 14516 | 100623875 ~ 100625726 (-) |
| c12h16orf72 | LOC106606270 | coding | downstream | 81392 | 100549187 ~ 100558850 (-) |
| eci1 | LOC106596253 | coding | downstream | 96789 | 100530184 ~ 100543453 (-) |
| nat15 | natu | coding | downstream | 140745 | 100473554 ~ 100499497 (-) |
| LOC118937869 | NA | coding | downstream | 148327 | 100490607 ~ 100491915 (-) |
| LOC118937873 | LOC106603827 | coding | upstream | 175786 | 100816544 ~ 100821913 (-) |
| LOC110518098 | LOC106581592 | coding | upstream | 301416 | 100942033 ~ 101130515 (-) |
| LOC118937863 | LOC106603827 | coding | upstream | 512786 | 101148360 ~ 101154161 (-) |
| LOC110511505 | LOC106593326 | coding | upstream | 514635 | 101154555 ~ 101271098 (-) |
| LOC118937847 | LOC106603827 | coding | upstream | 612828 | 101253586 ~ 101258211 (-) |
| G1134219 | NA | non-coding | downstream | 20737 | 100618662 ~ 100619505 (-) |
| G1134206 | NA | non-coding | downstream | 66878 | 100572518 ~ 100573364 (-) |
| G1134204 | NA | non-coding | downstream | 70172 | 100568999 ~ 100570070 (-) |
| G1134112 | NA | non-coding | downstream | 91119 | 100546791 ~ 100549123 (-) |
| LOC118937858 | LOC106591175 | non-coding | upstream | 8706 | 100628440 ~ 100651699 (-) |
| G1134239 | NA | non-coding | upstream | 39233 | 100679991 ~ 100680488 (-) |
| G1134272 | NA | non-coding | upstream | 127721 | 100768479 ~ 100814052 (-) |
| G1134273 | NA | non-coding | upstream | 129800 | 100770558 ~ 100770849 (-) |
| G1134280 | NA | non-coding | upstream | 153866 | 100794624 ~ 100797905 (-) |
| G1134183 | NA | other | downstream | 136154 | 100503605 ~ 100504088 (-) |
| G1134117 | NA | other | downstream | 217176 | 100420957 ~ 100423066 (-) |
| LOC118937853 | tmem114 | other | downstream | 344676 | 100258230 ~ 100295591 (-) |
| G1134316 | LOC106603753 | other | upstream | 186418 | 100827176 ~ 100828092 (-) |
| G1134339 | LOC106603894 | other | upstream | 299647 | 100940405 ~ 100941907 (-) |
| G1134323 | NA | other | upstream | 353052 | 100993810 ~ 100998516 (-) |
