Gene
RNA
| Item | Value |
|---|---|
| gene id | G1133273 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 100730038 ~ 100731283 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1290239 | True | 1130 | lncRNA | 0.40 | 3 | 100730038 | 100731283 |
100,726,000
100,726,400
100,726,800
100,727,200
100,727,600
100,728,000
100,728,400
100,728,800
100,729,200
100,729,200
100,729,600
100,730,000
100,730,400
100,730,800
100,731,200
100,731,600
100,732,000
100,732,400
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110538862 | ptx4 | coding | upstream | 41726 | 100674727 ~ 100688312 (+) |
| LOC110539066 | usp7 | coding | upstream | 105856 | 100562466 ~ 100624182 (+) |
| LOC110539064 | NA | coding | upstream | 200689 | 100520662 ~ 100529349 (+) |
| LOC110515889 | LOC105013474 | coding | upstream | 211650 | 100504433 ~ 100518388 (+) |
| LOC110512779 | abat | coding | upstream | 308215 | 100357004 ~ 100421823 (+) |
| LOC118937852 | LOC106606251 | coding | downstream | 33829 | 100765112 ~ 100809399 (+) |
| LOC110510646 | LOC106603827 | coding | downstream | 568624 | 101299907 ~ 101605694 (+) |
| LOC110516410 | LOC106581607 | coding | downstream | 616137 | 101347420 ~ 101390863 (+) |
| LOC118937611 | LOC106603827 | coding | downstream | 841669 | 101572952 ~ 101579641 (+) |
| LOC110539186 | LOC106603753 | coding | downstream | 939126 | 101670409 ~ 102479291 (+) |
| G1133311 | NA | non-coding | upstream | 425 | 100729099 ~ 100729613 (+) |
| G1133293 | NA | non-coding | upstream | 49165 | 100679974 ~ 100680873 (+) |
| G1133291 | NA | non-coding | upstream | 75130 | 100654690 ~ 100654908 (+) |
| G1133285 | NA | non-coding | upstream | 81883 | 100647089 ~ 100648155 (+) |
| G1133283 | NA | non-coding | upstream | 83693 | 100645153 ~ 100646345 (+) |
| G1133268 | NA | non-coding | downstream | 19842 | 100751125 ~ 100751557 (+) |
| G1133272 | NA | non-coding | downstream | 24524 | 100755807 ~ 100756262 (+) |
| G1133314 | NA | non-coding | downstream | 26973 | 100758256 ~ 100758551 (+) |
| G1133315 | NA | non-coding | downstream | 28041 | 100759324 ~ 100759585 (+) |
| G1133317 | NA | non-coding | downstream | 38493 | 100769776 ~ 100770305 (+) |
| G1133263 | NA | other | upstream | 98620 | 100628020 ~ 100631418 (+) |
| G1133219 | NA | other | upstream | 228593 | 100501117 ~ 100501445 (+) |
| G1133209 | NA | other | upstream | 253179 | 100475869 ~ 100476859 (+) |
| G1133325 | NA | other | downstream | 68259 | 100799542 ~ 100801010 (+) |
| G1133359 | LOC106603827 | other | downstream | 419004 | 101150287 ~ 101154319 (+) |
| G1133510 | NA | other | downstream | 425710 | 101156993 ~ 101170260 (+) |
| G1133665 | NA | other | downstream | 960144 | 101691427 ~ 101691975 (+) |
| G1133406 | LOC106603827 | other | downstream | 1203934 | 101935217 ~ 101938656 (+) |
