G1134280


Basic Information

Item Value
gene id G1134280
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100794624 ~ 100797905 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1291651
ctgtaccttaccctgagcctgcctgccgccctgtacctgaccctgagcctgccatcctgtaccttaccctgagcctgcctgccgtcctgtacctttgcccctgttgctgtaataaatattgttacttcgacacggtctacatctgggtcttaccttgattcctgatatatatatattattgttattttattgtgttacttttaattatATTAGTTTtgttattgtatttttttattaattatttTACGAAATATTTTTTGTTacttacttttttttaaactccacatgttggttaagggcttgtaagtaagcatttcacggtaaggcctACGACACCTGTTGTAAtcgacacgtgacaaataaaatttgacttGAAGCAAAGCACACAATTCTTCAGGAAAGTTACACTTTCTATTTTATGGTGTACTGTCATGTACAAGAGGCATCAAAGGCCTTTCAATcgatgcttcaagatgtccaccattgttcctgtacccaagtaagctaaggtaactgaactaaatgactatcgccccgcaGCACtctcttctgtcatcatgaagtgctttgagaggctagttaaggatcacctccacctccaccttccCCTGACAACCTAGACACACTACAactcacataccgccccaacagatccacggaacACGTAATCGCcgttgcacttcacactgccatATCCGACTTGGACAAGAAAAATACCTACAGGATGTAAGAATCAGGGGTTGGAACCGTTTCAGTGAACGGAActgaaaaacaaagaaaaaaaaattgaGGAACAGAACCAGAACCGAGAACAAAATTTAACTCTACCGTTCCGGAAcagaaacatttattttaaaagcatgggaaacagttaaTAACAGTTAATTATTTGAAGTTCCGTACATTTTTTCAAaccctctgtcactcagaaaggtattccagtgtctgcctgcatTCCAGCTGAACATCTTCTGTGTAGGCTAGCTGCCCCTCCCCGTCCCTCTGCCCTCCTGAAGCTTAGTCTACTGTAACTACTGACGTTACAAGCGTGATTCAGAAATTAAGGAGAGATTTTTAATTAGAGAAGAATTAGGATTAACTTGTTCAATGCTAATTAAGAAAACTATCGTTGTCACATtacacatttgttttttttaaactacaaAAACGTGTTTTAATTAAAATGTTGGTGCCGCTCTGctcacaagcttgttagctagctctggtctcgctctcaaactctaggcggcattacgtactgtataatgtaatgatgaagggctagctctggtctcgctctcaaactctaggcggCATTACGTACTGTATAATGTCATGATGAAGGGCTAGCTCTGGTctcgctctcaaactctaggcggcattacgtactgtataatgtaatgatgaagggctagctctggtctcgctctcaaactctaggcggCATTACGTACTGTATAATGTCATGATGAAGGGCTAGCTCTGGTctcgctctcaaactctaggcggcattacgtactgtataatgtaatgatgaagggctagctctggtctcgctctcaaactctaggcggCATTACGTACTGTATAATGTAatgatgaagggctagctctggtccaacgttaGTTAAGCCAACTCTATGAAGTATCTACATGGCATCATCAGTCTCTCTATGCTACTGTGCTAGCTTATACATGTTGTAGGGAACAGTCACAGACGctgctctctcggtctctctatgCTACTGTGCTAGCTTATACATGTTGTAGGGAACAGTCACAGACGctgctctctcggtctctctatgCTACTGTGCTAGCTTATACATGTTGTAGGGAACAGTCACAGACGctgctctctcggtctctctatgCTACTGTGCTAGCTTATACATGTTGTAGGGAACAGTCACAGACGctgctctctcggtctctctatgCTACTGTGCTAGCTTATACATGTTGTAGGGAACAGTCACAGACGctgctctctcggtctctctctctctgcctctagctctgtgtacctctctctctctatctctgtgtacctctctctatctctctgcatctctctctctctctgcctctatctctgtttctctctctctctcggatggTTCTATCACCTAGCAACCAGGTGACCTTTCCCATTTGTCTCAGTCTcagtttgtttgtatgtgtgtgtgtgtgtgtgttggttgtcCTTTGTGAAATAGAAGATAGTGGTGTATACTTAGATATCGTCTCATTCAAGGGAAGCCCctccacacccac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1291651 True 2277 lncRNA 0.43 3 100794624 100797905

Neighbor

gene id symbol gene type direction distance location
LOC118937858 LOC106591175 coding downstream 142925 100628440 ~ 100651699 (-)
LOC118937871 NA coding downstream 168898 100623875 ~ 100625726 (-)
c12h16orf72 LOC106606270 coding downstream 235774 100549187 ~ 100558850 (-)
eci1 LOC106596253 coding downstream 251171 100530184 ~ 100543453 (-)
nat15 natu coding downstream 295127 100473554 ~ 100499497 (-)
LOC118937873 LOC106603827 coding upstream 18639 100816544 ~ 100821913 (-)
LOC110518098 LOC106581592 coding upstream 144269 100942033 ~ 101130515 (-)
LOC118937863 LOC106603827 coding upstream 355639 101148360 ~ 101154161 (-)
LOC110511505 LOC106593326 coding upstream 357488 101154555 ~ 101271098 (-)
LOC118937847 LOC106603827 coding upstream 455681 101253586 ~ 101258211 (-)
G1134273 NA non-coding downstream 23775 100770558 ~ 100770849 (-)
G1134239 NA non-coding downstream 114136 100679991 ~ 100680488 (-)
G1134223 NA non-coding downstream 153866 100640242 ~ 100640758 (-)
G1134284 NA non-coding upstream 8920 100806825 ~ 100807230 (-)
G1134268 NA non-coding upstream 10641 100808546 ~ 100811030 (-)
G1134368 NA non-coding upstream 24192 100822097 ~ 100822329 (-)
G1134370 NA non-coding upstream 26060 100823965 ~ 100824179 (-)
G1134316 LOC106603753 non-coding upstream 29564 100827176 ~ 100828092 (-)
G1134183 NA other downstream 290536 100503605 ~ 100504088 (-)
G1134117 NA other downstream 371558 100420957 ~ 100423066 (-)
LOC118937853 tmem114 other downstream 499058 100258230 ~ 100295591 (-)
G1134339 LOC106603894 other upstream 142500 100940405 ~ 100941907 (-)
G1134323 NA other upstream 195905 100993810 ~ 100998516 (-)

Expression


Co-expression Network