G1134499


Basic Information

Item Value
gene id G1134499
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 101439089 ~ 101488747 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1292006
acattatatactgtcacctcatatgaaacattttatTTCAAATCCAAAATGTTGGCGTATAGAGCCACATTTAAAATGTCAGCTttactgtctaaatagatatggtgtggactgtatactcaatacaatctaaatctgatacttctctgtctaaatagatatggtgtggactgtatactcaatacaatctaagtctgatacctcactgtctaaatagatatggtgtggactgtatactcaatacaatctaaatctgatacctcactgtctaaatagatatggtgtggactgtatactcaatacaatctaaatctgatacctcactgtctaaatagatatggtgtggactgtatactcaatacaatctaaatctgatacctcactgtctgtcttctgaCTGATACTGCTTTTTAAACTGCTCTGGTCAGTCTACTATAATAT
>TU1292007
agattagcatgttttgttgtagtctctgttattggtaatggtgagaggttagcatgttttgttgtagtctctgttattggtaatggtgagaggttagcatgttttgttgtagtctctgttattggtaatggttagaggttagcatgttttgttgtagtctctgttattggtaatggtgagaggttagcatgttttgttgtagcctctgttattggtaatggtgactCACTGtctcctcactgtctaaatagatatggtgtggactgtatactcaatacaatctaaatctgatacctcactgtctaaatagatatggtgtggactgtttactcaatacaatctaaatctgattcctcactgtctaaatagatatggtgtggactgtatactcaatacaatctaaatctgatacctcactgtctaaatagatatggtgtggactgtatactcaatacaatctaaatctgacacctcactgtctaaatagatatggtgtggactgtatactcaatacaatctaaatctgatacctcactgtctaaatagatatggtgtggactgtatactcaatacaatctaaatctgatacctcactgtctgtcttctgaCTGATACTGCTTTTTAAACTGCTCTGGTCAGTCTACTATAATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1292006 False 441 lncRNA 0.34 2 101439089 101488747
TU1292007 True 652 lncRNA 0.36 2 101439089 101440010

Neighbor

gene id symbol gene type direction distance location
LOC118937872 NA coding downstream 156716 101271121 ~ 101282373 (-)
LOC110511505 LOC106593326 coding downstream 167991 101154555 ~ 101271098 (-)
LOC118937847 LOC106603827 coding downstream 180878 101253586 ~ 101258211 (-)
LOC118937863 LOC106603827 coding downstream 284935 101148360 ~ 101154161 (-)
LOC110518098 LOC106581592 coding downstream 308574 100942033 ~ 101130515 (-)
LOC118937846 LOC106592354 coding upstream 6348 101495095 ~ 101509022 (-)
LOC118937854 LOC106603827 coding upstream 193751 101682498 ~ 101684312 (-)
LOC110516333 LOC106603753 coding upstream 274365 101763112 ~ 101954471 (-)
LOC118937861 LOC106603827 coding upstream 320138 101808885 ~ 101809452 (-)
LOC110512533 LOC106603753 coding upstream 332016 101820763 ~ 101852176 (-)
G1134497 NA non-coding downstream 35190 101403443 ~ 101403899 (-)
G1134361 LOC106603827 non-coding downstream 47256 101390325 ~ 101391833 (-)
G1134485 NA non-coding downstream 49226 101357332 ~ 101389863 (-)
G1134484 NA non-coding downstream 50052 101356897 ~ 101389037 (-)
G1134476 NA non-coding downstream 100561 101336809 ~ 101338528 (-)
G1134510 NA non-coding upstream 27055 101515802 ~ 101516783 (-)
G1134517 NA non-coding upstream 56884 101545631 ~ 101576354 (-)
G1134520 NA non-coding upstream 59612 101548359 ~ 101548849 (-)
G1134523 NA non-coding upstream 69994 101558741 ~ 101565001 (-)
G1134524 NA non-coding upstream 70443 101559190 ~ 101564165 (-)
G1134312 LOC106603827 other downstream 350534 101076062 ~ 101088555 (-)
G1134323 NA other downstream 440573 100993810 ~ 100998516 (-)
G1134339 LOC106603894 other downstream 497182 100940405 ~ 100941907 (-)
G1134316 LOC106603753 other downstream 610997 100827176 ~ 100828092 (-)
G1134515 NA other upstream 47650 101536397 ~ 101594444 (-)
G1134303 LOC106601187 other upstream 267383 101756130 ~ 101817671 (-)
G1134287 LOC106592354 other upstream 456855 101437772 ~ 101954443 (-)
G1134612 NA other upstream 485902 101974649 ~ 101976006 (-)

Expression


Co-expression Network