G1133620


Basic Information

Item Value
gene id G1133620
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 101510771 ~ 101513059 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1290694
CTAGTGATGAGAGAACTGTTGTTCCCCTGGCTATTGATGAGAGAACTGTTGTTCCCCTGGCTATTGATGAGAGAActgttgtgcccctggctattGATGAGAGAACTGTTGCATTTGTTACATACATTAAAACAATCCCACGTTATAAATTAAAATGTAGCTGTGATTCAAACGAAAGAACGATGGAGCAACAAGAATTGATTAATCAGAAAATTCAGAAAGAATCCCAGCTGAGACACAGGccatagaaatgtaaaggtcatttcagactaagccgacatatgcagtgtttactgtgaatgcagtctccgtgAAGGAGGAACATCTCCTTTAAATGTCAACAACTTGTAGGCCTATGTCTGCTGTATATGAATATGTGTAGCCTGGCCTATATGATGAGTAACGTTATATTCAACCAGCCCATGTAGTGTTTCAGGCGTTCAGACAGTGAAAACTGATGCGTTTTAAGCTCTCGCCCAAAGCCTGTTGTCTTGGCATGTGGACATAAACTTTCTGATCAATCAAATATGTTCTTATTCTACTCATTACAAGTCTCTAGTAGCACAATCAAGCTGTTTCCCCAGTTTACTGAGGAGTATATTCAACCCCAGCTAAAATACTACAGACCAAtttattaaataaagtccaccacTGTCAGAGTCCTCAACTGTAGTGAGAAAATTGTGTCATAGGTTTAATCTGTTCCTCCATCAATATCACCATTGTTGTTGTAGTCATCACCCTCAGCCTCATTCATCTATTCCTCCATCAATATCACCATCGTTGTTGTAGTCATCACCCTCAGCCTCATTCATCTATTCCTCCATCAATATCACCATTGTTGTTGTAGTCATCACCCTCATCCTCATTCATCTATTCCTCCATCAATAGCACCATCGTTGTTGTAGTCATCACCCTCAGCCTCATTCATCTATTCCTCCATCAATATCACCATCGTTGTTGTAGTCATCACCCTCAGCCTCATTCATCTATTCCTCCATCAATATCACCATCGTTGTTGTAGTCATCACCCTCAGCCTCATTCATCTATTCCTCCATCAATATCACCATCGTTGTTGTAGTCATCACCCTCAGCCTCATTCATCTATTCCTCCATCAATATCACCATTGTTGTTGTAGTCATCACCCTCAGCCTCATTCATCTATTCCTCCATCAATATCACCATCGTTGTTGTAGTCATCACCCTCAGCCTCATTCATCTATTCCTCCATCAATATCACCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1290694 True 1245 lncRNA 0.41 2 101510771 101513059

Neighbor

gene id symbol gene type direction distance location
LOC110516410 LOC106581607 coding upstream 119908 101347420 ~ 101390863 (+)
LOC118937852 LOC106606251 coding upstream 701372 100765112 ~ 100809399 (+)
LOC110538858 clcn7 coding upstream 761072 100689259 ~ 100749699 (+)
LOC110538862 ptx4 coding upstream 822459 100674727 ~ 100688312 (+)
LOC110539066 usp7 coding upstream 886589 100562466 ~ 100624182 (+)
LOC118937611 LOC106603827 coding downstream 59893 101572952 ~ 101579641 (+)
LOC110539186 LOC106603753 coding downstream 157350 101670409 ~ 102479291 (+)
LOC118937840 LOC106603827 coding downstream 204730 101717789 ~ 101737160 (+)
LOC118937868 NA coding downstream 457552 101970611 ~ 101987336 (+)
LOC118937844 LOC106603753 coding downstream 1075196 102588255 ~ 102747507 (+)
G1133601 NA non-coding upstream 1555 101451390 ~ 101509216 (+)
G1133596 NA non-coding upstream 12112 101446859 ~ 101498659 (+)
G1133609 NA non-coding upstream 30657 101476655 ~ 101480114 (+)
G1133466 NA non-coding upstream 63171 101034876 ~ 101447600 (+)
G1133547 LOC106606276 non-coding upstream 64530 101259598 ~ 101446241 (+)
G1133623 NA non-coding downstream 2634 101515693 ~ 101596601 (+)
G1133624 NA non-coding downstream 3070 101516129 ~ 101538229 (+)
G1133626 NA non-coding downstream 24936 101537995 ~ 101538357 (+)
G1133636 NA non-coding downstream 67050 101580109 ~ 101582216 (+)
G1133641 NA non-coding downstream 82050 101595109 ~ 101595785 (+)
G1133510 NA other upstream 340511 101156993 ~ 101170260 (+)
G1133359 LOC106603827 other upstream 356452 101150287 ~ 101154319 (+)
G1133325 NA other upstream 709761 100799542 ~ 100801010 (+)
G1133263 NA other upstream 879353 100628020 ~ 100631418 (+)
G1133665 NA other downstream 178368 101691427 ~ 101691975 (+)
G1133406 LOC106603827 other downstream 422158 101935217 ~ 101938656 (+)
G1133749 NA other downstream 519428 102032487 ~ 102099906 (+)
G1133794 NA other downstream 618069 102131128 ~ 102135084 (+)

Expression

G1133620 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 50.
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G1133620 Expression in each Bioproject

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G1133620 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
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Co-expression Network