G1134524


Basic Information

Item Value
gene id G1134524
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 101559190 ~ 101564165 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1292042
ctcactctcagtgaaatcagtagtaccgctaggttttacacagtaataatatatatctgtctcactctcagtgaaatcagtagtactgctaggttttacacagtaataatatatatctgtctcactctcagtgaaatcagtagtactgctaggttttatacagtaataatatatatctgtctcactctcagagaaatcagtagtactgctaggttttacacagtaataatatatatctgcctcactctcagtgaaatcagtagtactgctaggttttacacagtaatgatatatatctgtctcactctcagagaaatcagtagtactgctaggttttacacagtaataatatatatcc
>TU1292043
gagaaatcagtagtactgctaggttttacacagtaataatatatatctgcctcactctcagagaaatcagtagtactgctaggttttacacagtaataatatatatctgtctcactctcagtgaaatcagtagtactgctaggttttatacagtaataatatatatctgtctcactctcagagaaatcagtagtactgctaggttttacacagtaataatatatatctgcctcactctcagtgaaatcagtagtactgctaggttttacacagtaatgatatatatctgtctcactctcagagaaatcagtagtactgctaggttttacacagtaataatatatatcc
>TU1292040
ctcactctcagtgaaatcagtagtaccgctaggttttacacagtaataatatatatctgtctcactctcagtgaaatcagtagtactgctaggttttacacagtaataatatatatctgtctcactctcagtgaaatcagtagtactgctaggttttacacagtaataatatatatctgcctcactcagagaaatcagtagtactgctaggttttacacagtaataatatatatctgtctcactctcagagaaatcagtagtactgctaggttttacacagtaataatatatatctgtctcattctcagtgaaatcagtagtactgctaggttttacacagtaataatatatatctgtctcactctcagagaaatcagtagtactgctaggttttacacagtaataatatatatctgtctcactctcagagaaatcagtagtactgctaggttttacacagtaataatatatatctgtctcattctca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1292042 False 358 lncRNA 0.34 3 101559190 101564165
TU1292043 False 348 lncRNA 0.34 2 101559190 101563495
TU1292040 True 488 lncRNA 0.34 3 101560018 101564165

Neighbor

gene id symbol gene type direction distance location
LOC118937846 LOC106592354 coding downstream 52852 101495095 ~ 101509022 (-)
LOC110519569 LOC106603827 coding downstream 85085 101380799 ~ 101474105 (-)
LOC118937872 NA coding downstream 276817 101271121 ~ 101282373 (-)
LOC110511505 LOC106593326 coding downstream 288092 101154555 ~ 101271098 (-)
LOC118937854 LOC106603827 coding upstream 118333 101682498 ~ 101684312 (-)
LOC110516333 LOC106603753 coding upstream 198947 101763112 ~ 101954471 (-)
LOC118937861 LOC106603827 coding upstream 244720 101808885 ~ 101809452 (-)
LOC110512533 LOC106603753 coding upstream 256598 101820763 ~ 101852176 (-)
LOC118937870 NA coding upstream 463890 102028055 ~ 102099442 (-)
G1134520 NA non-coding downstream 10341 101548359 ~ 101548849 (-)
G1134510 NA non-coding downstream 42407 101515802 ~ 101516783 (-)
G1134499 NA non-coding downstream 70443 101439089 ~ 101488747 (-)
G1134527 NA non-coding upstream 15902 101580067 ~ 101582279 (-)
G1134537 NA non-coding upstream 48662 101612827 ~ 101615184 (-)
G1134541 NA non-coding upstream 53991 101618156 ~ 101619329 (-)
G1134544 NA non-coding upstream 60894 101625059 ~ 101626529 (-)
G1134550 NA non-coding upstream 70556 101634721 ~ 101652497 (-)
G1134288 NA other downstream 107211 101446166 ~ 101451979 (-)
G1134312 LOC106603827 other downstream 470635 101076062 ~ 101088555 (-)
G1134323 NA other downstream 560674 100993810 ~ 100998516 (-)
LOC110518098 LOC106581592 other downstream 609439 100942033 ~ 101130515 (-)
G1134303 LOC106601187 other upstream 191965 101756130 ~ 101817671 (-)
G1134287 LOC106592354 other upstream 381437 101437772 ~ 101954443 (-)
G1134612 NA other upstream 410484 101974649 ~ 101976006 (-)
G1134325 NA other upstream 668873 102233038 ~ 102233671 (-)
G1134301 NA other upstream 670924 102235089 ~ 102236521 (-)

Expression


Co-expression Network