G1134550


Basic Information

Item Value
gene id G1134550
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 101634721 ~ 101652497 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1292087
tatgatctaggatcaggtcctcctctccatgtaatctgaatCATTATGATTTTGGATCAGGtccttatgatctaaaaggctaaactgatccacCTTTAAAGGAGCCTTTGGGGGATTTTTGAGACCAGGTCAACCTCATTTTTAACCCTTAGACTACAATGGTCTGTTGAAATGTAATGAACATAATAAACACATCCCCATCAAcatctgtctgtttaaactggagatgtctgtttaaactggagatgtctgtttaagatggagatgtctgtttaaactggagatgtctgtttaaactggagatgtctatttaaactggagatgtctgtttaaactggagatgtctatttaaactggagatgtctgttttttgcatgttttttttacatgggCTGTCTCAATCCAC
>TU1292086
tatgatctaggatcaggtcctcctctccatgtaatctgaatCATTATGATTTTGGATCAGGtccttatgatctaaaaggctaaactgatccacCTTTAAAGGAGCCTTTGGGGGATTTTTGAGACCAGGTCAACCTCATTTTTAACCCTTAGACTACAATGGTCTGTTGAAATGTAATGAACATAATAAACACATCCCCATCAAcatctgtctgtttaaactggagatgtctgtttaaactggagatgtctgtttaagatggagatgtctgtttaaactggagatgtctgtttaaactggagatgtctgtttaaactggagatgtctgtttaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1292087 False 406 lncRNA 0.37 2 101634721 101652497
TU1292086 True 333 lncRNA 0.38 2 101646219 101652497

Neighbor

gene id symbol gene type direction distance location
LOC118937846 LOC106592354 coding downstream 128383 101495095 ~ 101509022 (-)
LOC110519569 LOC106603827 coding downstream 160616 101380799 ~ 101474105 (-)
LOC118937872 NA coding downstream 352348 101271121 ~ 101282373 (-)
LOC110511505 LOC106593326 coding downstream 363623 101154555 ~ 101271098 (-)
LOC118937854 LOC106603827 coding upstream 30001 101682498 ~ 101684312 (-)
LOC110516333 LOC106603753 coding upstream 110615 101763112 ~ 101954471 (-)
LOC118937861 LOC106603827 coding upstream 156388 101808885 ~ 101809452 (-)
LOC110512533 LOC106603753 coding upstream 168266 101820763 ~ 101852176 (-)
LOC118937870 NA coding upstream 375558 102028055 ~ 102099442 (-)
G1134544 NA non-coding downstream 8192 101625059 ~ 101626529 (-)
G1134541 NA non-coding downstream 15392 101618156 ~ 101619329 (-)
G1134537 NA non-coding downstream 19537 101612827 ~ 101615184 (-)
G1134527 NA non-coding downstream 52442 101580067 ~ 101582279 (-)
G1134523 NA non-coding downstream 69720 101558741 ~ 101565001 (-)
G1134554 NA non-coding upstream 6055 101658552 ~ 101669199 (-)
G1134558 NA non-coding upstream 19608 101672105 ~ 101672674 (-)
G1134351 NA non-coding upstream 35748 101688245 ~ 101811206 (-)
G1134562 NA non-coding upstream 37995 101690492 ~ 101691355 (-)
G1134563 NA non-coding upstream 38386 101690883 ~ 101692255 (-)
G1134515 NA other downstream 40277 101536397 ~ 101594444 (-)
G1134288 NA other downstream 182742 101446166 ~ 101451979 (-)
G1134312 LOC106603827 other downstream 546166 101076062 ~ 101088555 (-)
G1134323 NA other downstream 636205 100993810 ~ 100998516 (-)
G1134303 LOC106601187 other upstream 103633 101756130 ~ 101817671 (-)
G1134287 LOC106592354 other upstream 293105 101437772 ~ 101954443 (-)
G1134612 NA other upstream 322152 101974649 ~ 101976006 (-)
G1134325 NA other upstream 580541 102233038 ~ 102233671 (-)
G1134301 NA other upstream 582592 102235089 ~ 102236521 (-)

Expression


Co-expression Network