G1134554


Basic Information

Item Value
gene id G1134554
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 101658552 ~ 101669199 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1292091
ATATTAATACTATGATAATGAACTGAACAGGTATATGAATCTAATATTAATACTAATGAACTGAACAGGTCTATGaatctaatattaatactatggtaatgaactgaacaggtctatgaatctaatattaatactaatgaactgaacagGTCTATGAATCTAATATGAATACTATGGTAATGAACTGAACAGgtctatgaatctaatattaatactatggtAATGAACTGAACAGGTCTATGGATCTAATATTAATACTAATGAACTGAACAAGTCGATGCTTGTCAACAACAGCCAAGGTTTTATAACCTGTTTCCTAATTTGACTGTTACCTTCAATCTAATGCATTCTAACCTCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGACCTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGACCTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAAATGTTACCTTCAATCTAATGCATTCTAAAATCTGATCAGCCATTGAGATAGAACTGTTACCATGGTCACACTTGATAACTTCCTCCTGAATTAACTAAACATGGTCATTACTAgttaaataataacacaaggctacAACAAAAATAAACTGAAGTTACAGGTTATTTATTAAATCAGTTTACCGGCTCCAGGTTGGTTACACAAGTGGCACAAAACGATTTGCAACAACTCCAgtcatttcaacatatttatAGTATAAAATGGTAGCCTAGATAGGCATAAAGATGaataggctacagtagcctagatAGGCATAAAGATGaataggctacagtagcctagatAGGCATAAAGATGaatagGCTACAGTGGCCTAGATAGGCATAAAGATGaataggctacagtagcctagatAGGCATAAAGATGaataggctacagtagcctagatAGGCATACAGATGaataggctacagtagcctagatAGGCATAAAGATGaataggctacagtagcctagatAGGCATACAGATGAATAGgctacagtagcctagatAGGCATAAAGATGaatagGCTAAAGTAGCCTAGATAGGCATACAGATGAACAGGCTACTTGATGGCCAACAGATGTTTCATTCTCCACATTTAAAGTCAGTTTCATTGTGGAGTTTTTCTGAAAGTTCCAGAACTTTGATTTCAAATTTCCACTCGTGACCCAATAACTGAGCCTCCGCGTGATATGGTTTTCCATCAGTAAAGTCGACATTATAATGCCATTTAAACCACCTCTGAGTGAATTTATCTCACACGCTCCAGTGCGCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGTTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCCAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGAACCTAAAGTAGTTTTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGAACCTAAAGTAGTTTTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCCAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTC
>TU1292093
atctaatactaatactaatgaactgaacaggtctatgaatctaatattaatactatggtAATGAACTGAACAGGTTTATGAATCTAATATTAATACTAATGAACTGAACAGGTCTATGAATCTAATATGAATACTATGGTAATGAACTGAACAGgtctatgaatctaatattaatactatggtAATGAACTGAACAGGTCTATGGATCTAATATTAATACTAATGAACTGAACAAGTCGATGCTTGTCAACAACAGCCAAGGTTTTATAACCTGTTTCCTAATTTGACTGTTACCTTCAATCTAATGCATTCTAACCTCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGACCTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGACCTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAAATGTTACCTTCAATCTAATGCATTCTAAAATCTGATCAGCCATTGAGATAGAACTGTTACCATGGTCACACTTGATAACTTCCTCCTGAATTAACTAAACATGGTCATTACTAgttaaataataacacaaggctacAACAAAAATAAACTGAAGTTACAGGTTATTTATTAAATCAGTTTACCGGCTCCAGGTTGGTTACACAAGTGGCACAAAACGATTTGCAACAACTCCAgtcatttcaacatatttatAGTATAAAATGGTAGCCTAGATAGGCATAAAGATGaataggctacagtagcctagatAGGCATAAAGATGaataggctacagtagcctagatAGGCATAAAGATGaatagGCTACAGTGGCCTAGATAGGCATAAAGATGaataggctacagtagcctagatAGGCATAAAGATGaataggctacagtagcctagatAGGCATACAGATGaataggctacagtagcctagatAGGCATAAAGATGaataggctacagtagcctagatAGGCATACAGATGAATAGgctacagtagcctagatAGGCATAAAGATGaatagGCTAAAGTAGCCTAGATAGGCATACAGATGAACAGGCTACTTGATGGCCAACAGATGTTTCATTCTCCACATTTAAAGTCAGTTTCATTGTGGAGTTTTTCTGAAAGTTCCAGAACTTTGATTTCAAATTTCCACTCGTGACCCAATAACTGAGCCTCCGCGTGATATGGTTTTCCATCAGTAAAGTCGACATTATAATGCCATTTAAACCACCTCTGAGTGAATTTATCTCACACGCTCCAGTGCGCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGTTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCCAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGAACCTAAAGTAGTTTTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGAACCTAAAGTAGTTTTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCCAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTC
>TU1292094
taatactaatgaactgaacaggtctatgaatctaatattaatactatggtAATGAACTGAACAGGTTTATGAATCTAATATTAATACTAATGAACTGAACAGGTCTATGaatctaatattaatactatggtaatgaactgaacaggtctatgaatctaatattaatactaatgaactgaacaggtctatgaatctaatattaatactaatgaactgaacagGTCTATGAATCTAATATTAATACTAATGAACTGAACAGGTCTATGAATCTAATATTAATACTAATGAACTGAACAGGTCTATGAATCTAATATTAATACTAATGAACTGAATAGGTCTATGaatctaatattaatactatggtaatgaactgaacaggtctatgaatctaatattaatactatggtaatgaactgaacaggtctatggatctaatattaatactatggtaatgaactgaacaggtctatgaatctaatattaatactatggtAATGAACTGAACAGGTCTATGGATCTAATATTAATACTAATGAACTGAACAAGTCGATGCTTGTCAACAACAGCCAAGGTTTTATAACCTGTTTCCTAATTTGACTGTTACCTTCAATCTAATGCATTCTAACCTCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGACCTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGACCTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAACTGTTACCTTCAATCTAATGCATTCTAACATCTGATCAGCCATTGAGATAGAAATGTTACCTTCAATCTAATGCATTCTAAAATCTGATCAGCCATTGAGATAGAACTGTTACCATGGTCACACTTGATAACTTCCTCCTGAATTAACTAAACATGGTCATTACTAgttaaataataacacaaggctacAACAAAAATAAACTGAAGTTACAGGTTATTTATTAAATCAGTTTACCGGCTCCAGGTTGGTTACACAAGTGGCACAAAACGATTTGCAACAACTCCAgtcatttcaacatatttatAGTATAAAATGGTAGCCTAGATAGGCATAAAGATGaataggctacagtagcctagatAGGCATAAAGATGaataggctacagtagcctagatAGGCATAAAGATGaatagGCTACAGTGGCCTAGATAGGCATAAAGATGaataggctacagtagcctagatAGGCATAAAGATGaataggctacagtagcctagatAGGCATACAGATGaataggctacagtagcctagatAGGCATAAAGATGaataggctacagtagcctagatAGGCATACAGATGAATAGgctacagtagcctagatAGGCATAAAGATGaatagGCTAAAGTAGCCTAGATAGGCATACAGATGAACAGGCTACTTGATGGCCAACAGATGTTTCATTCTCCACATTTAAAGTCAGTTTCATTGTGGAGTTTTTCTGAAAGTTCCAGAACTTTGATTTCAAATTTCCACTCGTGACCCAATAACTGAGCCTCCGCGTGATATGGTTTTCCATCAGTAAAGTCGACATTATAATGCCATTTAAACCACCTCTGAGTGAATTTATCTCACACGCTCCAGTGCGCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGTTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCCAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGAACCTAAAGTAGTTTTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGAACCTAAAGTAGTTTTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCTAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTCACCTTATCTCCAGAGCCCCTAAAGTAGTTGTCCTGTGCTTTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1292091 False 2035 lncRNA 0.38 7 101658552 101669199
TU1292093 False 1997 lncRNA 0.38 5 101658552 101661803
TU1292094 True 2307 lncRNA 0.37 6 101658552 101668156

Neighbor

gene id symbol gene type direction distance location
LOC118937846 LOC106592354 coding downstream 152214 101495095 ~ 101509022 (-)
LOC110519569 LOC106603827 coding downstream 184447 101380799 ~ 101474105 (-)
LOC118937872 NA coding downstream 376179 101271121 ~ 101282373 (-)
LOC110511505 LOC106593326 coding downstream 387454 101154555 ~ 101271098 (-)
LOC118937854 LOC106603827 coding upstream 13299 101682498 ~ 101684312 (-)
LOC110516333 LOC106603753 coding upstream 93913 101763112 ~ 101954471 (-)
LOC118937861 LOC106603827 coding upstream 139686 101808885 ~ 101809452 (-)
LOC110512533 LOC106603753 coding upstream 151564 101820763 ~ 101852176 (-)
LOC118937870 NA coding upstream 358856 102028055 ~ 102099442 (-)
G1134550 NA non-coding downstream 6055 101634721 ~ 101652497 (-)
G1134544 NA non-coding downstream 32023 101625059 ~ 101626529 (-)
G1134541 NA non-coding downstream 39223 101618156 ~ 101619329 (-)
G1134537 NA non-coding downstream 43368 101612827 ~ 101615184 (-)
G1134527 NA non-coding downstream 76273 101580067 ~ 101582279 (-)
G1134558 NA non-coding upstream 2906 101672105 ~ 101672674 (-)
G1134351 NA non-coding upstream 19046 101688245 ~ 101811206 (-)
G1134562 NA non-coding upstream 21293 101690492 ~ 101691355 (-)
G1134563 NA non-coding upstream 21684 101690883 ~ 101692255 (-)
G1134570 NA non-coding upstream 49988 101719187 ~ 101719554 (-)
G1134515 NA other downstream 64108 101536397 ~ 101594444 (-)
G1134288 NA other downstream 206573 101446166 ~ 101451979 (-)
G1134312 LOC106603827 other downstream 569997 101076062 ~ 101088555 (-)
G1134323 NA other downstream 660036 100993810 ~ 100998516 (-)
G1134303 LOC106601187 other upstream 86931 101756130 ~ 101817671 (-)
G1134287 LOC106592354 other upstream 276403 101437772 ~ 101954443 (-)
G1134612 NA other upstream 305450 101974649 ~ 101976006 (-)
G1134325 NA other upstream 563839 102233038 ~ 102233671 (-)
G1134301 NA other upstream 565890 102235089 ~ 102236521 (-)

Expression


Co-expression Network