XLOC_030140 (zgc:174260)


Basic Information

Item Value
gene id XLOC_030140
gene name zgc:174260
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 28812453 ~ 28818613 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058938
ACTCAGTCTAGTTTGGGAAAAGAGGAACAACAGCTGTCTGAAGAGAGACTTCAAGACCATGGAACGGAACGGTGTATTTTTGTGGATTTGTGGTTTTGCAGTAGTTGTCTGTGGGAATCAAGAGACTTTACAACAACCTCCCATTAGCGCTAAACTCCCGTCATTGATAAACATGAACAACGATTTCGCTTTTCACCTGTACAAGAGGCTTATAGAATCGCCTGACTATCAGTCCAAAAACATCTTCTTCTCTCCGTTCAGtgtgtcTATGGCCCTTTCTGAGCTTTCTTTAGGAGCTGGTGGAGACACCAAACAGCAGCTTCTCAGTGGCATTGGCTACAACAGCACAATCTTCAGCACTGAGGAAATGCACCAGCTGTTTCACAGTCTCCTGGAAGACATCGGCAATAGGACAGAAGTGGACATCGATGTCGGCACTGCTCTTTATGCAAGCGACCGATTTAAGCCTCATtctaagtttctggaggacatgAAGGAGTTTTACCACTCTGATGGCTTCACTGTAGATTTCAGGGTCAAAGAAACAGTcgatcaaattaataaatatgtggAGGAAAAAACACATGGAAAAATCAATCAAGCTGTCGATGATCTGGAAGAGGATACTTTGATGTTTCTTCtcacatacatatattttaaagGAAAATGGGACAAGCCTTTTAACCCAGACACAACCAGTGAGAGTAAATTTAATATAGATGATAAGACCACCGTTCCAGTGCAAATGATGCATCAGTATGAATGTCTCAAAGTCTATTATGATGTTGAACTATTCAGTAAAGTCCTCTGTCTTGACTACAACGATTCCTTTTCCATGTTTCTGGCTGTCCCAGATGTTCACATGGGGCGAAAAACCATCAAAGATCTAGAGATGACAATCTCTAGACAGCACATTAAAAAGTGGAGGAGAGGTGTATCTAAAGATGAAGTTGACATCTACGTCCCCAAGCTTTCTCTGAAAACATCATACTCGCTGAAGGATATTTTGAAGGGAATGGGAATGGCTGATATGTTTTCAGATAAAGCCGACTTTACAGGAGTTTCAGAGGAAACATTTTCGTTTCACAGGTTTTGCATAAAGCCACTCTGGATATCGATGAGCAAGGAACCACCGCAGCAGCAGTGACAGAAGATAATGAAAGATTTGTGTCCTACAGCCCATTGAGTATTATTAGGTTTGATCACCCATTCATGATCTTTATCACGGATCAAACAAATGACAACATCCTTTTCTTTGGGAAAGTCGTCAACCCAAATGAAAAACTGTGATGTGGCCCACAACATGTTAAAACAATGTTAGCCAGTAggtggaaaacatttaaaaacttctGTGGCATATTTTGCAGACTACTAGAGTCGCCTTCCTGCAGAGTTCTTACTGTTATGAAACACCCGGATCAGCTTATGTAGGTGATGGTTGGAAATAAACTGCAAGAAACTGGACCTGCAAAACTGG

Function

symbol description
zgc:174260 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space.

GO:

id name namespace
GO:0010951 negative regulation of endopeptidase activity biological_process
GO:0005615 extracellular space cellular_component
GO:0004867 serine-type endopeptidase inhibitor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080213-9 Predicted to enable serine-type endopeptidase inhibitor activity. Predicted to be involved in negative regulation of endopeptidase activity. Predicted to be active in extracellular space.

Ensembl:

ensembl_id ENSDARG00000091800

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058938 True 1477 unprocessed_pseudogene 0.41 6 28812453 28818613

Neighbor

gene id symbol gene type direction distance location
XLOC_030139 si:ch211-186e20.7 coding upstream 10203 28797771 ~ 28802250 (+)
XLOC_030138 trafd1 coding upstream 22353 28770273 ~ 28790100 (+)
XLOC_030137 NA coding upstream 250316 28561003 ~ 28562137 (+)
XLOC_030136 NA coding upstream 309276 28497934 ~ 28503177 (+)
XLOC_030135 NA coding upstream 320935 28393348 ~ 28491518 (+)
XLOC_030141 CR559930.1 coding downstream 5999 28824612 ~ 28826140 (+)
XLOC_030142 serpina7 coding downstream 11775 28830388 ~ 28832950 (+)
XLOC_030143 zgc:174259 coding downstream 30257 28848870 ~ 28851407 (+)
XLOC_030144 si:ch211-186e20.2 coding downstream 39356 28857969 ~ 28859840 (+)
XLOC_030145 NA coding downstream 97906 28916519 ~ 28918961 (+)
XLOC_030132 NA non-coding upstream 520042 28282169 ~ 28292411 (+)
XLOC_030126 NA non-coding upstream 1157735 27654250 ~ 27654718 (+)
XLOC_030148 CT956057.3 non-coding downstream 395917 29214530 ~ 29214646 (+)
XLOC_030149 NA non-coding downstream 423181 29241794 ~ 29243160 (+)
XLOC_030150 NA non-coding downstream 741446 29560059 ~ 29565825 (+)

Expression


Co-expression Network