XLOC_030141 (CR559930.1)


Basic Information

Item Value
gene id XLOC_030141
gene name CR559930.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 28824612 ~ 28826140 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058939
AACAGCAGCTTCTCAGTGGCATTGGCTACAGTAGTGCAATCTTCAGCACTGAGGAAATGCACCAGCTGTTTCACAGTCTCCTGGAAGACATCGGCAATAGGACAGGAGAGGACATCGATATCGGCACTGCTCTTTATGCAAGCGACCGATTTAAGCCTCATtctaagtttctggaggacatgAAGGAGTTTTACCACTCGGATGGCTTCACTGTAGATTTTAGGGTCAAAGAAACAGTcgatcaaattaataaatatgtggAGGAAAAAACACATGGAAAAATCAATCAAGCTGTCGATGATCTGGAAGAGGATACTTTGATGTTACTTCtcacatacatatattttaaagCAAAATGAGACAAGCCTTTTAACCCAGAAACAACCAGCGAGAGTACATTTCATATAGATGATAAGACCACCGTTCCAGTGCAAATGCTGCATCAGTATGAACGTCTCAAAGTCTATTATGATGCTGAACTGTCCACTAAAGTCCTCTGTCTTGACTACAACGACTCCTTCTGCATGTTTCTTTCTGTCCCAGATGTTCACATGGGGCGAAAAACCATCAAAGATCTAGAGATGACAATCTCTAGACAGCACATTGAAAATTGGAGAAGAGATGTATTTGAACATGAAGTTGACATCTACGTCCCCAAGCTTTCTCTGAAAACATCATACTCTCTGAAGGATATTTTGAAGGGAATGGGAATGGCTGATATGTTTTCAGATAAAGCTGATTTTACAGGAGTTTCAGAGGAAAGGATCTTCGTTTTGCATAAAGCCACTCTGGATATCGATGAGAAAGGAACCAccgcagcagcagtgaaag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000090916

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058939 True 831 unprocessed_pseudogene 0.41 4 28824612 28826140

Neighbor

gene id symbol gene type direction distance location
XLOC_030140 zgc:174260 coding upstream 5999 28812453 ~ 28818613 (+)
XLOC_030139 si:ch211-186e20.7 coding upstream 22362 28797771 ~ 28802250 (+)
XLOC_030138 trafd1 coding upstream 34512 28770273 ~ 28790100 (+)
XLOC_030137 NA coding upstream 262475 28561003 ~ 28562137 (+)
XLOC_030136 NA coding upstream 321435 28497934 ~ 28503177 (+)
XLOC_030142 serpina7 coding downstream 4248 28830388 ~ 28832950 (+)
XLOC_030143 zgc:174259 coding downstream 22730 28848870 ~ 28851407 (+)
XLOC_030144 si:ch211-186e20.2 coding downstream 31829 28857969 ~ 28859840 (+)
XLOC_030145 NA coding downstream 90379 28916519 ~ 28918961 (+)
XLOC_030146 stxbp1b coding downstream 146795 28972935 ~ 29002322 (+)
XLOC_030135 NA non-coding upstream 333094 28393348 ~ 28491518 (+)
XLOC_030132 NA non-coding upstream 532201 28282169 ~ 28292411 (+)
XLOC_030148 CT956057.3 non-coding downstream 388390 29214530 ~ 29214646 (+)
XLOC_030149 NA non-coding downstream 415654 29241794 ~ 29243160 (+)
XLOC_030150 NA non-coding downstream 733919 29560059 ~ 29565825 (+)
XLOC_030153 NA non-coding downstream 958032 29784172 ~ 29792624 (+)

Expression


Co-expression Network