G1133363


Basic Information

Item Value
gene id G1133363
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 101888504 ~ 101992008 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1290348
TTGCTATAGTGACCCTGCATTACAACACTCTGTTGCTATAGTAACCCTGCATTACAACACTCTGTTGCAATAGTGACCCTGCATCACAACACTCTGTTGCAATAGTGACCCTGCATCACAacactctgttgctatagtgaccctgcatcacaacactctgttgctatagtaaccctgcatgacaacactctgttgctatagtgaccctgCATCACAACACTCTGTTGTACTAATTGTACAATTTGTTTagggaagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcgtcatggagggaagtggacctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcgtcatggagggaggtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcgtcatggagggaagtggagctaacatcatcatgaagggaagtggagctaacagagagagttgacatcatcatgaagggaagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcgtcatggagggaagtggagctaacatcatcatgaagggaagtggagctaacagagagagttaacatcatcatgaagggaagtggagctaacagaaagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcgtcatggagggaagtggacctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcgtcatggagggaagtggacctaacagagagagttaacatcatcatggagggaagaggagctaacagagagagttaacatcatcatggagggatgtgcatagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagttaacatcatcatggagggaagtgcatagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcatcatggagggaagtggagctagcagagagagttaacatcatcatggagggaagtggagctagcagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcatcatggagggaagtggaggtaacagagagagttaacatcatcatggagggaagaggagctaacagagagagttaacatcatcatggagggatgtgcatagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagttaacatcatcatggagggaagtgcatagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagagagagttaacatcatcatggagggaagtggagctaacagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1290348 True 1667 lncRNA 0.45 2 101888504 101992008
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118937840 LOC106603827 coding upstream 151344 101717789 ~ 101737160 (+)
LOC110510646 LOC106603827 coding upstream 282810 101299907 ~ 101605694 (+)
LOC118937611 LOC106603827 coding upstream 308863 101572952 ~ 101579641 (+)
LOC110516410 LOC106581607 coding upstream 497641 101347420 ~ 101390863 (+)
LOC118937852 LOC106606251 coding upstream 1079105 100765112 ~ 100809399 (+)
LOC118937844 LOC106603753 coding downstream 596247 102588255 ~ 102747507 (+)
LOC110516933 LOC106603753 coding downstream 755926 102747839 ~ 102766589 (+)
LOC118937867 LOC106603827 coding downstream 761963 102753971 ~ 102756123 (+)
LOC118937845 LOC106603753 coding downstream 794300 102786308 ~ 102791744 (+)
LOC118937839 LOC106603753 coding downstream 842617 102834625 ~ 102846630 (+)
G1133713 NA non-coding upstream 1092 101886999 ~ 101887412 (+)
G1133700 NA non-coding upstream 2139 101885796 ~ 101886365 (+)
G1133711 NA non-coding upstream 3025 101884012 ~ 101885479 (+)
G1133710 NA non-coding upstream 4992 101882390 ~ 101883512 (+)
G1133689 NA non-coding upstream 17554 101784200 ~ 101870950 (+)
G1133745 NA non-coding downstream 33515 102025523 ~ 102027265 (+)
G1133749 NA non-coding downstream 40479 102032487 ~ 102099906 (+)
G1133750 NA non-coding downstream 45023 102037031 ~ 102102409 (+)
G1133751 NA non-coding downstream 45533 102037541 ~ 102040791 (+)
G1133752 NA non-coding downstream 50346 102042354 ~ 102043073 (+)
G1133665 NA other upstream 196529 101691427 ~ 101691975 (+)
G1133510 NA other upstream 718244 101156993 ~ 101170260 (+)
G1133359 LOC106603827 other upstream 734185 101150287 ~ 101154319 (+)
G1133325 NA other upstream 1087494 100799542 ~ 100801010 (+)
G1133263 NA other upstream 1257086 100628020 ~ 100631418 (+)
G1133794 NA other downstream 139120 102131128 ~ 102135084 (+)
LOC110539186 LOC106603753 other downstream 475719 101670409 ~ 102479291 (+)
G1133958 NA other downstream 654639 102646647 ~ 102686598 (+)
G1133977 NA other downstream 726554 102718562 ~ 102719478 (+)

Expression

G1133363 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
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G1133363 Expression in each Bioproject

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G1133363 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
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Co-expression Network