Gene
RNA
| Item | Value |
|---|---|
| gene id | G1134633 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 102051729 ~ 102053310 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1292215 | False | 603 | lncRNA | 0.41 | 4 | 102051729 | 102053310 |
| TU1292217 | False | 267 | lncRNA | 0.39 | 3 | 102051729 | 102053108 |
| TU1292218 | False | 317 | lncRNA | 0.40 | 3 | 102051729 | 102052535 |
| TU1292216 | True | 336 | lncRNA | 0.40 | 2 | 102052067 | 102052535 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110516333 | LOC106603753 | coding | downstream | 97258 | 101763112 ~ 101954471 (-) |
| LOC110512533 | LOC106603753 | coding | downstream | 199553 | 101820763 ~ 101852176 (-) |
| LOC118937861 | LOC106603827 | coding | downstream | 242277 | 101808885 ~ 101809452 (-) |
| LOC118937854 | LOC106603827 | coding | downstream | 367417 | 101682498 ~ 101684312 (-) |
| LOC118937846 | LOC106592354 | coding | downstream | 545391 | 101495095 ~ 101509022 (-) |
| LOC118937864 | LOC106603827 | coding | upstream | 27618 | 102080928 ~ 102087118 (-) |
| LOC118937612 | LOC106593326 | coding | upstream | 63295 | 102116605 ~ 102232078 (-) |
| LOC118937843 | LOC106601187 | coding | upstream | 188803 | 102236650 ~ 102545195 (-) |
| LOC118937850 | NA | coding | upstream | 375812 | 102429122 ~ 102444659 (-) |
| LOC118937613 | LOC106603753 | coding | upstream | 431459 | 102484769 ~ 102536330 (-) |
| G1134628 | NA | non-coding | downstream | 3429 | 102047946 ~ 102048300 (-) |
| G1134626 | NA | non-coding | downstream | 12744 | 102037661 ~ 102038985 (-) |
| G1134622 | NA | non-coding | downstream | 32079 | 102018233 ~ 102019650 (-) |
| G1134575 | NA | non-coding | downstream | 49483 | 102001150 ~ 102002246 (-) |
| G1134618 | NA | non-coding | downstream | 50629 | 101996751 ~ 102001100 (-) |
| G1134634 | NA | non-coding | upstream | 1226 | 102054536 ~ 102055058 (-) |
| G1134638 | NA | non-coding | upstream | 16896 | 102070206 ~ 102070925 (-) |
| G1134639 | NA | non-coding | upstream | 17670 | 102070980 ~ 102071572 (-) |
| G1134643 | NA | non-coding | upstream | 35882 | 102089192 ~ 102089753 (-) |
| G1134290 | NA | non-coding | upstream | 51913 | 102105223 ~ 102106343 (-) |
| G1134612 | NA | other | downstream | 75723 | 101974649 ~ 101976006 (-) |
| G1134287 | LOC106592354 | other | downstream | 97286 | 101437772 ~ 101954443 (-) |
| G1134303 | LOC106601187 | other | downstream | 288476 | 101756130 ~ 101817671 (-) |
| G1134515 | NA | other | downstream | 457285 | 101536397 ~ 101594444 (-) |
| G1134325 | NA | other | upstream | 179728 | 102233038 ~ 102233671 (-) |
| G1134301 | NA | other | upstream | 181779 | 102235089 ~ 102236521 (-) |
| G1134299 | LOC106581592 | other | upstream | 310825 | 102364135 ~ 102366535 (-) |
| G1134329 | NA | other | upstream | 313789 | 102367099 ~ 102375142 (-) |
