XLOC_030145


Basic Information

Item Value
gene id XLOC_030145
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 28916519 ~ 28918961 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00061711
tcaaaacataacaataaaataagtCACAAAAGGATTTGAGTAGCATACAATTAAAAAGGTTAAGATGCAGTATAGTACCAAGTGcttgtaactaataaataaaagaaaatatattcaGTTACATCCAAGTTGAAGTACTTGTCATTTCATAGATAAAACTGCACTTAAGAAAATCTCAAACAGCAAGGAGGAAACCTTGTGGACAGATGCATCGAAGACAACTATTTGCACAACAAACATTTCAATTTGAAATACAAAGATCTAATATTAGTATCTGGTTTTCTGTCAGTGGCGCTGTACTAACATGAATATGAATTAAATCGACCTacggtattaaaaaaaaaaaaaaaaaaaaaaaaaaactcacctgtCTTAAATAAAATGACACGCATCTCCACAAAGACCCACAACCCTCTGCAGCACAGTATCCTCAGCATTGACTAAAACTACTACAGTGCACATGCAACCCAGATATTTGATACGGATTTGATAAAGCaattacacataaaaataaaaaataataataataaaaatgaaaagctcAACAGTGGAAAAGCCACCATTTGGAAAATCACTTGAATTCATTTGTACGGTTTTGGAACTGGGATTAAAATGATGCACTCTTTACCAGTTAAACCACAGCATCAGAATATCTTCTGTGCAGAAAACTGACATTTCCTTATGCCATTTTCAGCAACAACAAAAATTGCTTAGGCATTAAAcaaacttacataaaaaaaaaaaaaaaaccttatgaaAAAATTAAAGTCAGTGTCTTCAGTTTGAATTCTGGGCGAGGCAGATGATTTTgatcaataaaaacaaatctgaTGGAACAACATAGTTTAAATAAGGCAACATATGCTATTAACATCGGGCAGAATGTGTCTGCTTTACGTCATGATTTTCAGCACACTCAGAAATGATTGAGAATCCTAATAGTGTTGGATTTCGTATTTATGATTAGAAAGACATTTTGACCTACTGTAAGACGTGTATATAATCGAGTCCAGCTCTGAGtgacgtgattttttttttctaagtgcAAAAATTGTGACAGCGTGACAAGAACAAAAATAGACACTACAATAGACACTAAATAATGTCTATACAGTCAGAAATGTGAGACTATAGTGAAAATAAAACTctcttttaaagggatagatgATCAATTACCCTGCACTTTTCCAAACATGGATcgtttcttttttatgttgaacataaaacaatatattttaaagaacgtTGAATACCAtgtcaaacattcttcaaaacatcttttttttaatgttaacacaaataagaaatgtataaatggtttggaactacttgtggttgagtaaacagtgagttaATAGTCATacctgggtgaactatccctttaagagcaaTGTGTAATGCATTTCCTCAATGTTTGCAGGTATACAAACACATTAACTGAATCGTCTTTTCACTTGTGATCCACGTGTGCACTTTCTCCCTTCCCAGTGTCCTCTCCTGTCTCAGCGTCATTACATTCCTGCTTTTCCATTGGATGCTCCTCTACTTTTACCTCATTAGCGGGCGACTGGACTCCACTGTCGTCCTGCTGTAACGAACAGATGGGCTTTTCCGTGTGGGAGTCTTGATTACCCTCCGTAATGTGATTTTCCTGTTGATCTGATGCCGTCACGGCCTCCACTTCCCTAACGGCTGAATCCTCTGAACCTAAAGGTGGCTTCTCCTCAACCGCATTTCTGTTCACATCCTCTTTGGTTCCGTTGGGCACTTGCTTCTCCGATTTTTGGGATAATGAGGTGTCTGAATGTACCTCGGTCTCCTCCTCTGGAATTTTGCCCACGTTGGGCACTTCCAGACATGACTCGTGGGGCAGCACTGATGCGGTGCCCTCTAACTGGATCATGGAGACCACCTGCTTCATCCTGCGCCTCTTCTGAGCTTCGGGATCTCCAGCGTTTTCTCCACCTGCCTCCTCCTGGCCTCCTCCATACTCCTCAGCCCAGTCGATGGCAGGGTTTTCTGCCAGGAGGTGAAGGTTTGGGTCGCTGTTGGTCAAAACAATGCTGTCTCGGTATAGGTTGTGTCTCCTCTGGACTGCTGCTTCCTTCACCGCTGGAGACATAAGAGGAAATGTTGATCAGACCACACTGATGGCATGAATGCATTGTGGAATCTCTAATAACATTTattccaaatttcaaataaaaactatTGTCATTTAGAGAATATG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00061711 True 2230 lncRNA 0.38 2 28916519 28918961

Neighbor

gene id symbol gene type direction distance location
XLOC_030144 si:ch211-186e20.2 coding upstream 56679 28857969 ~ 28859840 (+)
XLOC_030143 zgc:174259 coding upstream 65112 28848870 ~ 28851407 (+)
XLOC_030142 serpina7 coding upstream 83569 28830388 ~ 28832950 (+)
XLOC_030141 CR559930.1 coding upstream 90379 28824612 ~ 28826140 (+)
XLOC_030140 zgc:174260 coding upstream 97906 28812453 ~ 28818613 (+)
XLOC_030146 stxbp1b coding downstream 53974 28972935 ~ 29002322 (+)
XLOC_030147 dpp7 coding downstream 240816 29159777 ~ 29177272 (+)
XLOC_030148 CT956057.3 coding downstream 295569 29214530 ~ 29214646 (+)
XLOC_030149 NA coding downstream 322833 29241794 ~ 29243160 (+)
XLOC_030150 NA coding downstream 641098 29560059 ~ 29565825 (+)
XLOC_030137 NA non-coding upstream 354382 28561003 ~ 28562137 (+)
XLOC_030136 NA non-coding upstream 413342 28497934 ~ 28503177 (+)
XLOC_030135 NA non-coding upstream 425001 28393348 ~ 28491518 (+)
XLOC_030153 NA non-coding downstream 865211 29784172 ~ 29792624 (+)
XLOC_030159 NA non-coding downstream 983192 29902153 ~ 29988431 (+)

Expression


Co-expression Network