G1134648


Basic Information

Item Value
gene id G1134648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 102145309 ~ 102164325 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1292235
GGCTGTTATCCAGATACCTGCTGGTACCTCTTAGGACAGCTGATGAGGCTATTAACCAGATACCTGCTGGTACCTCTTAGGACAGCTGATGAGGCTATTATCCAGATACCTGCTGGTACCTCTTAGGACAGCTGATAGGGCTATTATCCAGATACCAGCTAATGAGGCTGTTATCCAGATACCTGCTGGTACCTCTTAGGACAgctattgaaaataagaatttgttcttattaactgacttgcctggttaaataaaggtcaaaaaaaaaaaaaaaaaaataaaaaaaaaaaaaatattacctATTTTAGcctcaacccctaaccctaattctaggGTAGCCTAGAACAATTTCAGAAACTGTTTTAGTAATAATATTATGTTAGTAAATACCATCATGGTACTAAATAGCATTTTGATTATTGTGTTAATCAAAACCTGTCTCAGTATTttgctgtttttgttttgttattttattatatGTATTATTGCAAGGCAgaactactgatttctctgagagtgaggcagatactgtatatagcaaTTGGAAGAAAAACAtaattatttgtctctctgacaaaaaaccatcaagtgatagattttaaacGAATACATGTCTGTTAATGAACAacccccatgtcatgattagatagtgaacaaacccatgattagatagtgaacaaacccatgattagatagtgaacaacctcaTGCCATGaatagatagtgaacaaccccatgattagatagtgaacaaccccatgacatgattagatagtgaacaaccccatgatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1292235 True 793 lncRNA 0.35 3 102145309 102164325

Neighbor

gene id symbol gene type direction distance location
LOC118937870 NA coding downstream 45867 102028055 ~ 102099442 (-)
LOC118937864 LOC106603827 coding downstream 58191 102080928 ~ 102087118 (-)
LOC110516333 LOC106603753 coding downstream 190838 101763112 ~ 101954471 (-)
LOC110512533 LOC106603753 coding downstream 293133 101820763 ~ 101852176 (-)
LOC118937861 LOC106603827 coding downstream 335857 101808885 ~ 101809452 (-)
LOC118937843 LOC106601187 coding upstream 77788 102236650 ~ 102545195 (-)
LOC118937850 NA coding upstream 264797 102429122 ~ 102444659 (-)
LOC118937613 LOC106603753 coding upstream 320444 102484769 ~ 102536330 (-)
LOC118937849 LOC106593326 coding upstream 479384 102643709 ~ 102646059 (-)
LOC118937851 NA coding upstream 562791 102727116 ~ 102730779 (-)
G1134285 LOC106603827 non-coding downstream 29382 102112012 ~ 102115927 (-)
G1134290 NA non-coding downstream 38966 102105223 ~ 102106343 (-)
G1134643 NA non-coding downstream 55556 102089192 ~ 102089753 (-)
G1134639 NA non-coding downstream 73737 102070980 ~ 102071572 (-)
G1134638 NA non-coding downstream 74384 102070206 ~ 102070925 (-)
G1134652 NA non-coding upstream 2788 102167113 ~ 102170712 (-)
G1134653 NA non-coding upstream 34498 102198823 ~ 102199162 (-)
G1134656 NA non-coding upstream 64571 102228896 ~ 102229442 (-)
G1134325 NA non-coding upstream 68713 102233038 ~ 102233671 (-)
G1134327 NA non-coding upstream 69897 102234222 ~ 102290795 (-)
G1134612 NA other downstream 169303 101974649 ~ 101976006 (-)
G1134287 LOC106592354 other downstream 190866 101437772 ~ 101954443 (-)
G1134303 LOC106601187 other downstream 382056 101756130 ~ 101817671 (-)
G1134515 NA other downstream 550865 101536397 ~ 101594444 (-)
LOC118937846 LOC106592354 other downstream 636287 101495095 ~ 101509022 (-)
G1134301 NA other upstream 70764 102235089 ~ 102236521 (-)
G1134299 LOC106581592 other upstream 199810 102364135 ~ 102366535 (-)
G1134329 NA other upstream 202774 102367099 ~ 102375142 (-)

Expression


Co-expression Network