G1134325


Basic Information

Item Value
gene id G1134325
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 102233038 ~ 102233671 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1291788
CTTTTATGTTGAATAACAAATAGTACAATTAtgtatggacatacgctccacatacactgctgatgtcgcagaaaggccataaagatcatcaaggacaacaaccacccgagccactgcctgttcaccccgctatcatccagaaggagaggtcagtacaggtgcatcatcaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaagtcagtacaggtgcatcaaagcagggaccgagagactgaaaaacagctgccaacatactgactcaactccagccactttaataatggaaattgatggaaattgatggaaaaaaatgcatcactagccactttacaATGCCACCTAATATAATgtgtac
>TU1291790
CTTTTATGTTGAATAACAAATAGTACAATTAtgtatggacatacgctccacatacactgctgatgtcgcagaaaggccataaagatcatcaaggacaacaaccacccgagccactgcctgttcaccccgctatcatccagaaggagaggtcagtacaggtgcatcatcaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaagtcagtacaggtgcatcatcaccacccgagccactgcctgttcaccccgctatcatccagaaggagaggtcagtacaggtgcatcatcaccacccgagccactgcctgttcaccctgctatcatccagaaggcgaagtcagtacaggtgcatcaaagcagggaccgagagactgaaaaacagctgccaacatactgactcaactccagccactttaataatggaaattgatggaaattgatggaaaaaaatgcatcactagccactttacaATGCCACCTAATATAATgtgtac
>TU1291791
CTTTTATGTTGAATAACAAATAGTACAATTAtgtatggacatacgctccacatacactgctgatgtcgcagaaaggccataaagatcatcaaggacaacaaccacccgagccactgcctgttcaccccgctatcatccagaaggagaggtcagtacaggtgcatcatcaccacccgagccactgcctgttcaccccgctatcatccagaaggcgaagtcagtacaggtgcatcaaagcagggaccgagagactgaaaaacagcttctatcttaaggcaatcagactgtttatcagccaccactaacattgagtggctgctgccaacatactgactcaactccagccactttaataatggaaattgatggaaattgatggaaaaaaatgcatcactagccactttacaATGCCACCTAATATAATgtgtac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1291788 False 374 lncRNA 0.45 3 102233038 102233671
TU1291790 False 510 TUCP 0.48 3 102233038 102233671
TU1291791 True 430 lncRNA 0.45 2 102233038 102233671

Neighbor

gene id symbol gene type direction distance location
LOC118937612 LOC106593326 coding downstream 960 102116605 ~ 102232078 (-)
LOC118937870 NA coding downstream 133596 102028055 ~ 102099442 (-)
LOC118937864 LOC106603827 coding downstream 145920 102080928 ~ 102087118 (-)
LOC110516333 LOC106603753 coding downstream 278567 101763112 ~ 101954471 (-)
LOC110512533 LOC106603753 coding downstream 380862 101820763 ~ 101852176 (-)
LOC118937843 LOC106601187 coding upstream 8442 102236650 ~ 102545195 (-)
LOC118937850 NA coding upstream 195451 102429122 ~ 102444659 (-)
LOC118937613 LOC106603753 coding upstream 251098 102484769 ~ 102536330 (-)
LOC118937849 LOC106593326 coding upstream 410038 102643709 ~ 102646059 (-)
LOC118937851 NA coding upstream 493445 102727116 ~ 102730779 (-)
G1134656 NA non-coding downstream 3596 102228896 ~ 102229442 (-)
G1134653 NA non-coding downstream 33876 102198823 ~ 102199162 (-)
G1134652 NA non-coding downstream 62326 102167113 ~ 102170712 (-)
G1134648 NA non-coding downstream 68713 102145309 ~ 102164325 (-)
G1134646 NA non-coding downstream 77202 102119978 ~ 102155836 (-)
G1134327 NA non-coding upstream 551 102234222 ~ 102290795 (-)
G1134666 NA non-coding upstream 12618 102246289 ~ 102246670 (-)
G1134676 NA non-coding upstream 47919 102281590 ~ 102283649 (-)
G1134678 NA non-coding upstream 52969 102286640 ~ 102287541 (-)
G1134612 NA other downstream 257032 101974649 ~ 101976006 (-)
G1134287 LOC106592354 other downstream 278595 101437772 ~ 101954443 (-)
G1134303 LOC106601187 other downstream 469785 101756130 ~ 101817671 (-)
G1134515 NA other downstream 638594 101536397 ~ 101594444 (-)
LOC118937846 LOC106592354 other downstream 724016 101495095 ~ 101509022 (-)
G1134301 NA other upstream 1418 102235089 ~ 102236521 (-)
G1134299 LOC106581592 other upstream 130464 102364135 ~ 102366535 (-)
G1134329 NA other upstream 133428 102367099 ~ 102375142 (-)
G1134697 NA other upstream 155105 102388776 ~ 102389352 (-)

Expression


Co-expression Network