XLOC_030149



Basic Information


Item Value
gene id XLOC_030149
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007116.7
NCBI id CM002889.2
chromosome length 72500376
location 29241794 ~ 29243160 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00061712
CCAACAGGCCCTGGAGGTCCACTGAGAAGTCTGTATCTTCTTCCATCCTTGCCTAATATAACATCTCCATGTTTACGGATAACTCTTGAAAACTTGTTGTCAGCTCTTACAGTGCCTATAAGCATTTCATATCCTTTTTGTGAGGAAACATCGACCGAAGGCTGTTTAACTACTTGACTAGAGTACCCAGAGATGCTCTGTGAGGAAAGTAAGAAACCTTCTTCAGTCAACTGGTTTAACTCGGGATGGACTGTGGGCCTGAGCAGATCCTTCTGACCAGCTGACGTCTTTACATTTAAGCTAGAATCCAGCTCAGAGATGTCCCCAGACGGCTTCAAATGGTGCTGCTCCAGACGACCTTTACTCAAATCAGCTTTCAGTTTTTGAGTTGTGAAAGTCTCTGATGATTTGAAGGTGGTGGACTGGATCTTTTTGTCCTTGGTGTCCTTAAACCTGCTATGTGTGCTTACGACAGGAGACGCGAGGCGCTCAGACTCATCCACCACCACAAAGCCACGGACCGACTGCTTTGAAGAAGTTCTGTTCGGATGAGAAGAAATGGCCCATTTTTGAGAGACACTGGAGTTCAGAT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00061712 True 592 lncRNA 0.46 2 29241794 29243160

Neighbor


gene id symbol gene type direction distance location
XLOC_030148 CT956057.3 coding upstream 27148 29214530 ~ 29214646 (+)
XLOC_030147 dpp7 coding upstream 64522 29159777 ~ 29177272 (+)
XLOC_030146 stxbp1b coding upstream 239472 28972935 ~ 29002322 (+)
XLOC_030145 NA coding upstream 322833 28916519 ~ 28918961 (+)
XLOC_030144 si:ch211-186e20.2 coding upstream 381954 28857969 ~ 28859840 (+)
XLOC_030150 NA coding downstream 316899 29560059 ~ 29565825 (+)
XLOC_030151 tsc1a coding downstream 409038 29652198 ~ 29711948 (+)
XLOC_030152 ddx31 coding downstream 471626 29714786 ~ 29745566 (+)
XLOC_030153 NA coding downstream 541012 29784172 ~ 29792624 (+)
XLOC_030154 thy1 coding downstream 550898 29794058 ~ 29803293 (+)
XLOC_030141 CR559930.1 non-coding upstream 415654 28824612 ~ 28826140 (+)
XLOC_030140 zgc:174260 non-coding upstream 423181 28812453 ~ 28818613 (+)
XLOC_030137 NA non-coding upstream 679657 28561003 ~ 28562137 (+)
XLOC_030159 NA non-coding downstream 658993 29902153 ~ 29988431 (+)
XLOC_030160 mir100-2 non-coding downstream 746987 29990147 ~ 29990221 (+)
XLOC_030161 dre-let-7a-4 non-coding downstream 747292 29990452 ~ 29990544 (+)

Expression



Co-expression Network