G1134756


Basic Information

Item Value
gene id G1134756
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 102621230 ~ 102627820 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1292384
ttatgttttattatgaaaAATACAATATCTTCTTGTATACTTGTACAACTAAATAcactaaaatcacattttatttgtcacatacacatggttagcagatgttaatgtgagtttagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacgagtaatctaacctaacgaTTTCACAACAATGACCTTATATacatacacaagtgtaaagggataaagaatatgtacataaacatacatgaatgagtgatggtacagaacggcataggcaagatgcagtagatggtatcgagtacagtatatacccatgagatgagtaatgtagggtatgtacacATTATATTAGGTGGCATtgtaaagtggctagtgatgcatttttttccatcaatttccatcaatttccatcaatttccattattaaagtggctggagttgagtcagtatgttggcagctgtttttcagtctctcggtccctgctttgatgcacctgtactgacttcgccttctggatgatcgcggggtgaacaggcagtggctcgggtggtgatgatgcacctgtactgactttgccttctggatgatagcagggtgaacaggcagtggctcgggtggtgatgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggtgatgatgcacctgtactgacttcgccttctggatgatagcggggtgaacaggcagtggctcgggtggtgatgatgcacctgtactgacctctccttctggatgatagcggggtgaacaggcagtggctcgggtggttgttgtccttgatgatctttatggcctttctgcgacatcagcagtgtatgtggagcgtatgtccatacaTAATTGTACTATTTGTTATTCAACATAAAATTTTAACGGTGTTattgtttaaattgtttaaattttAGAGTTTAAATGTTtaaacagaggatccatctaaaacagaataaaacaagatgataaacagaggatccttctaaaacagtataaaacaagatgataaacagaggatccatctaaaacagtataaaacaagatgataaacagaggatccatctaaaacagtataaaacaagatgataaacagaggatccatctaaaacagtataaaacaagatgataaacagaggatccatctaaaacagtataaaacaagatgataaacagaggatccatctaaaacagtataaaacaagatgataaacagaggatccatctaaaacagtataaaacaagatgataaacagaggatccatcttaaac
>TU1292383
ttatgttttattatgaaaAATACAATATCTTCTTGTATACTTGTACAACTAAATAcactaaaatcacattttatttgtcacatacacatggttagcagatgttaatgtgagtttagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacgagtaatctaacctaacgaTTTCACAACAATGACCTTATATacatacacaagtgtaaagggataaagaatatgtacataaacatacatgaatgagtgatggtacagaacggcataggcaagatgcagtagatggtatcgagtacagtatatacccatgagatgagtaatgtagggtatgtacacATTATATTAGGTGGCATtgtaaagtggctagtgatgcatttttttccatcaatttccatcaatttccatcaatttccattattaaagtggctggagttgagtcagtatgttggcagctgtttttcagtctctcggtccctgctttgatgcacctgtactgacttcgccttctggatgatcgcggggtgaacaggcagtggctcgggtggtgatgatgcacctgtactgactttgccttctggatgatagcagggtgaacaggcagtggctcgggtggtgatgatgcacctgtactgacctcgccttctggatgatagcggggtgaacaggcagtggctcgggtggtgatgatgcacctgtactgacttcgccttctggatgatagcggggtgaacaggcagtggctcgggtggtgatgatgcacctgtactgacctctccttctggatgatagcggggtgaacaggcagtggctcgggtggttgttgtccttgatgatctttatggcctttctgcgacatcagcagtgtatgtggagcgtatgtccatacaTAATTGTACTATTTGTTATTCAACATAAAATTTTAACGGTGTTattgtttaaattgtttaaattttAGAGTTTAAATGTTGAAACAGAGGATGCATCTaaaactgtcatgttgtcttgtctctgtcctttcccttcaccctgtctccctctgctggtcgttgttatgttaccttttctccccctcttttccccagctgtgccttgtctcctcctaattacccattcaccccgttccccacctgttccctttttccctctgattaggtccctatatctctctctgtttctgctcctgtccttgtcggattcttgtttgtttgtttatgtgtctcatgcctgaaccagactatcatcgtgtgtgctgcaaccttgtcctgtcctgtcggaatctacctgtccatctgagcccacgtatgttcgtcattaaagtactctgtttgttaattcgcttttgggtcctcattcacgcaccataacagaagaatccgaccgggaatggacccagcgacttcggatcctctccactcagccgtcgagatccagggagcgatgctaggcagacacaagcaggaattgtctgctgctcgacatgccgttgagaccctggccacccaagtctccaacctcacagaacaggttcaccatctccgcctcgatccaccggccacttccagggctttcgaatctccggagcccagaatcaataacccgccgtgttactctggggagcccactgaatgccgctcgttcctcacccagtgtgatattgtgttttc

Function

NR:

description
PREDICTED: protein LDOC1-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1292384 False 1319 lncRNA 0.39 4 102621230 102627820
TU1292383 True 1673 TUCP 0.46 3 102626065 102627820

Neighbor

gene id symbol gene type direction distance location
LOC118937843 LOC106601187 coding downstream 76035 102236650 ~ 102545195 (-)
LOC118937613 LOC106603753 coding downstream 120183 102484769 ~ 102536330 (-)
LOC118937850 NA coding downstream 176571 102429122 ~ 102444659 (-)
LOC118937612 LOC106593326 coding downstream 389152 102116605 ~ 102232078 (-)
LOC118937870 NA coding downstream 521788 102028055 ~ 102099442 (-)
LOC118937849 LOC106593326 coding upstream 15889 102643709 ~ 102646059 (-)
LOC118937851 NA coding upstream 99296 102727116 ~ 102730779 (-)
LOC118937857 NA coding upstream 184781 102812601 ~ 102819699 (-)
G1134755 NA non-coding downstream 11 102620661 ~ 102621219 (-)
G1134754 NA non-coding downstream 5471 102614978 ~ 102615759 (-)
G1134745 NA non-coding downstream 34036 102585885 ~ 102587194 (-)
G1134738 NA non-coding downstream 50086 102570326 ~ 102571144 (-)
G1134725 NA non-coding downstream 90321 102503922 ~ 102530909 (-)
G1134291 NA non-coding upstream 6985 102634805 ~ 102635668 (-)
G1134315 LOC106603827 non-coding upstream 9278 102637098 ~ 102642619 (-)
G1134343 NA non-coding upstream 24849 102652669 ~ 102686028 (-)
G1134761 NA non-coding upstream 64372 102692192 ~ 102693334 (-)
G1134763 NA non-coding upstream 66409 102694229 ~ 102694737 (-)
G1134697 NA other downstream 231878 102388776 ~ 102389352 (-)
G1134329 NA other downstream 246088 102367099 ~ 102375142 (-)
G1134299 LOC106581592 other downstream 254695 102364135 ~ 102366535 (-)

Expression


Co-expression Network