Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110511566 |
| gene name | LOC106593831 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 1388854 ~ 1402751 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger protein 239-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036939831.1 | False | 1975 | mRNA | 0.42 | 2 | 1388854 | 1396550 |
| XM_036939830.1 | False | 3108 | mRNA | 0.41 | 2 | 1388854 | 1402751 |
| TU1293216 | True | 798 | lncRNA | 0.40 | 3 | 1395890 | 1396846 |
1,386,000
1,388,000
1,390,000
1,392,000
1,394,000
1,396,000
1,398,000
1,400,000
1,402,000
1,404,000
1,406,000
1,408,000
1,410,000
1,412,000
1,414,000
1,416,000
1,418,000
NC_048577.1
Loading
Loading
Loading
Loading
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938132 | NA | coding | upstream | 6453 | 1368089 ~ 1382401 (+) |
| LOC110513328 | LOC106595349 | coding | upstream | 23612 | 1357009 ~ 1365242 (+) |
| LOC118938502 | NA | coding | upstream | 53530 | 1324822 ~ 1335324 (+) |
| LOC118938126 | NA | coding | upstream | 70462 | 1312719 ~ 1318392 (+) |
| LOC118938140 | NA | coding | upstream | 104122 | 1283525 ~ 1284732 (+) |
| LOC110511565 | LOC106593831 | coding | downstream | 3116 | 1405867 ~ 1417255 (+) |
| LOC110500805 | NA | coding | downstream | 18429 | 1421180 ~ 1440541 (+) |
| LOC110506851 | LOC106594001 | coding | downstream | 130774 | 1533525 ~ 1554229 (+) |
| LOC118938504 | LOC106592137 | coding | downstream | 173652 | 1576403 ~ 1583587 (+) |
| LOC110506155 | LOC106595729 | coding | downstream | 184041 | 1586792 ~ 1617009 (+) |
| G1135347 | NA | non-coding | upstream | 26592 | 1361509 ~ 1362262 (+) |
| G1135108 | NA | non-coding | upstream | 70471 | 875652 ~ 1318383 (+) |
| G1135315 | NA | non-coding | upstream | 123143 | 1183648 ~ 1265711 (+) |
| G1135311 | NA | non-coding | upstream | 131185 | 1164719 ~ 1257669 (+) |
| G1135373 | NA | non-coding | downstream | 11642 | 1414393 ~ 1414833 (+) |
| G1135377 | NA | non-coding | downstream | 19576 | 1422327 ~ 1424026 (+) |
| G1135390 | NA | non-coding | downstream | 50460 | 1453211 ~ 1453537 (+) |
| G1135355 | NA | other | upstream | 3051 | 1382438 ~ 1385803 (+) |
| G1135135 | NA | other | upstream | 83483 | 1302239 ~ 1305371 (+) |
| G1135265 | LOC106586052 | other | upstream | 536697 | 839169 ~ 852157 (+) |
| LOC118938495 | NA | other | upstream | 580176 | 802023 ~ 810582 (+) |
| LOC118938396 | LOC106595654 | other | downstream | 220349 | 1623073 ~ 1627806 (+) |
| G1135455 | LOC106607538 | other | downstream | 401622 | 1804373 ~ 1823552 (+) |
| LOC118938404 | LOC106594479 | other | downstream | 512120 | 1914705 ~ 1935643 (+) |
| G1135625 | NA | other | downstream | 597558 | 2000309 ~ 2068901 (+) |
| G1135672 | NA | other | downstream | 910102 | 2282956 ~ 2429608 (+) |
| G1135368 | NA | non-coding | upstream | 2140 | 1393499 ~ 1393750 (+) |
