LOC118938134


Basic Information

Item Value
gene id LOC118938134
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 1454762 ~ 1458002 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939851.1
CCGCTATGTTTTGAAAACACTTATATGCGTAAAAAGAACACACTCAGTTACCCCATGTAATGTCATATTGACGTTGTTATTCAGCTAGctggctggttaagttagcactagtctagtcgctaatgctaactagctagctaacatccctgaccattAGTTCACGAAGCTACTCCCCCCCTGCTAAAGAGGAGGTCTGTTGGATGGAGAAAGGAACTCTCttaaaagaggaggaagaggaggctgtacCAGTGAAAGAAAAAGAGGAAGAAGCTTAcagagtgaaagaagaagaggatgatgttactgtgaaagaagaggaggatggagtttTGGGGGTTGAAGAGGGGGAGATGACTGTCgtagtgaaagaagaggaagactgtTTTGGCGTGACGGAGATGCCTGTcgcagtgaaagaagaggaagactgtTTTGGTGTGATGGAGATGACTGTagcagtgaaagaagaggaagactgtTTTGGCGTGACGGAGATGACTGTcgcagtgaaagaagaggaagactgtTTTGGCGTGACGGAGATGACGGTCACattggaagaagaggaagagcagGCTGGAGATCTGATGAGCACCGGTACATACAgagagagaccagactctcACTCTGACAGCGAGAAGAGTCCTTTAGGGGAACCAGAGCCAGAGACGTCCATACCAGCAAGACCACACCACTGCTCCCAccgtggaaagagttttactaaTTCACGGAACCTAAAAGAGCATgagaggatacacacaggagaaaatgCTTTTcaatgctcccagtgtgaaaAGAGTTTTAAAGAGTTAGAGAACCTGAAAATACACAAGAGAACACACTCTgaagagaagccttaccactgctcccaatgtggaatgACATTTAGGTGGTTACAAGGCCTGAaaaggcatgagagaatacacacaggagaaaagccctaCCGCTGTTCCCACTGTGAAAATAGTTTTAGGTGGTTAGAAGGCCTGAaaaggcatgagagaatacacacaggagaaaatcCCTACCAATGCTCCCACTGTGGAAGGAGTTTTACTCAGTTAGCGAGCCTGAAATCACATCAGAGGATACATACACAGGAgaagacataccactgctctaaTTGTGGAAAGACATTTTCCCGGGCAGAggacctgaaatcacatgagagaatagagaggctGTGTTCTGACTTGTGTTTTTGACCTGAGaatttgtgttttatgttcatgcCAAATTAAATCATATTGTTTAAATTAAA
>TU1293921
ttactaaTTCACGGAACCTAAAAGAGCATgagaggatacacacaggagaaaatgCTTTTcaatgctcccagtgtgaaaAGAGTTTTAAAGAGTTAGAGAACCTGAAAATACACAAGAGAACACACTCTgaagagaagccttaccactgctcccaatgtggaatgACATTTAGGTGGTTACAAGGCCTGAaaaggcatgagagaatacacacaggagaaaagccctaCCGCTGTTCCCACTGTGAAAATAGTTTTAGGTGGTTAGAAGGCCTGAaaaggcatgagagaatacacacaggagaaaatcCCTACCAATGCTCCCACTGTGGAAGGAGTTTTACTCAGTTAGCGAGCCTGAAATCACATCAGAGGATACATACACAGGAgaagacataccactgctctaaTTGTGGAAAGACATTTTCCCGGGCAGAggacctgaaatcacatgagagaatagagaggctGTGTTCTGACTTGTGTTTTTGACCTGAGaatttgtgt

Function

NR:

description
zinc finger protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939851.1 False 1261 mRNA 0.45 2 1454762 1458002
TU1293921 True 503 TUCP 0.43 1 1454803 1455305

Neighbor

gene id symbol gene type direction distance location
LOC118938503 NA coding downstream 107184 1337556 ~ 1347578 (-)
LOC118938117 NA coding downstream 155645 1288784 ~ 1299117 (-)
LOC110517551 NA coding downstream 186678 1258219 ~ 1268084 (-)
LOC118938500 NA coding downstream 202341 1247116 ~ 1252421 (-)
LOC118938498 NA coding downstream 228883 1217316 ~ 1225879 (-)
LOC110500806 LOC106593838 coding upstream 4377 1462379 ~ 1471601 (-)
LOC110500910 NA coding upstream 18757 1476759 ~ 1482911 (-)
LOC110500809 LOC106593733 coding upstream 26582 1484584 ~ 1490547 (-)
LOC110500803 NA coding upstream 38983 1496985 ~ 1500964 (-)
LOC110500808 LOC106592918 coding upstream 66634 1524636 ~ 1531929 (-)
G1136121 NA non-coding downstream 4865 1442082 ~ 1449897 (-)
G1136170 NA non-coding downstream 14234 1440018 ~ 1440528 (-)
G1136123 LOC106593831 non-coding downstream 14764 1416086 ~ 1439998 (-)
G1136149 NA non-coding downstream 50329 1402410 ~ 1404433 (-)
G1136138 NA non-coding downstream 65312 1389144 ~ 1389450 (-)
G1135831 NA non-coding upstream 3399 1461401 ~ 1461742 (-)
G1136184 NA non-coding upstream 11034 1469036 ~ 1469453 (-)
G1135824 NA non-coding upstream 48141 1506143 ~ 1506418 (-)
G1136112 NA other downstream 115160 1338663 ~ 1339602 (-)
LOC118938492 LOC106592651 other downstream 770300 661073 ~ 684462 (-)
G1135918 NA other downstream 778792 605252 ~ 675970 (-)
LOC110511976 LOC106564555 other downstream 847466 592263 ~ 607296 (-)
LOC118938112 LOC106593206 other downstream 864843 572204 ~ 590402 (-)
LOC110506157 LOC106593263 other upstream 106661 1562605 ~ 1565409 (-)
LOC110487328 NA other upstream 211371 1668582 ~ 1671456 (-)
LOC110487301 LOC106595892 other upstream 516929 1938873 ~ 1996032 (-)
LOC110515515 LOC106563994 other upstream 622144 2030808 ~ 2096917 (-)

Expression


Co-expression Network