LOC110487328


Basic Information

Item Value
gene id LOC110487328
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 1668582 ~ 1671456 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036942274.1
tgacgtataatctagtggacgggacgttccttcaacaacaacagctagtcAGACACCTCGGTAGCTTTCTGGCAAACATAGCTACAACATTCACGCTCTTTACACTGTTTTGGTGTTGTAAAGTTCTGTCGTTTAGATAGTTACCTTATTTAATGTTATATGTACATTGTTACTCAGCTAACTGGCTTAATAAGTTAGCTTAGAgctaggctagtcgctaatgctaccTAGCTAACATCTCCGACCATGAGTTCACTGAGCTACTCTCCTCCTGATAAAGAAGATGCGGTCTGCTGGACGGAGGAAGAGGGTCTGtggctgaacattgtcgtgaaagaggagaaagaagaggaggatgtcacCGTTAAAAAACAAGTAGAGGTTGAGTCTGTTCCGGTTAAAGACGAAGAGAAAGAcgttactgtgaaagaagaggaagactcgttcagagtgaaagaggaggaggatgttacagtgaaagaagaggaggaagagcaaGAGGCGAAtgcaggagaggagggggagatgactgtcacattgaaagaagacgacgaggaggagacagaagatcTGATTAAGACCAGGGAGGGACCAGACTCCCACTCTGACAGCGGAAAGAGTCCTTCAGGGGAACCAGACCCAGAGACGCCCAAACCAGGGAGACaacaccactgctcccaatgtgaaAAGAGATTTTCCCAATCAGGGGACCTAAAACGGCATGAGaggatacacacaggggagaagcctttccaatgttcccagtgtggaaagtgttttaaCCGCTTAAGCAACCTGAAGGCGCATGAGAggatacacacacattatttccaatgttcccagtgtgggaaGCGTTTTGCCTGCTTAAGCAGGCTGAAgaggcatgagaggacacacacaggggaaaagcctttccaatgttcccagtgtggaaagcgttTTACCCACTTAAGGAGCCTGACGacgcatgagaggacacacacaaggGAAAAtcctttccaatgttcccagtgtggaaagcatTTTACCCGCTTAAAGAGCCTGACGacgcatgagaggacacacacaggggaaaagcctttccaatgttcccaaTGTGGGAAGCGTTTTACCCGCTTAAGGAGCCTGGAGGAGCATGAGAggatacacacaggggaaaatcctttccaatgttcccagtgtggaaagcgttTTACCCGCTTAAGGAGCCTGGAGGAGCATGAGAggatacacacaggggaaaagcctttccaatgttcccagtgtgggaaGCGTTTTACCCGCTTAAGTAGCCTGAAGAAGCATGAAAAgatacacacaggggaaaagccCTACCAATGCTCcctgtgtggaaagagttttaccaacTTAAGACATCTGAATAAGCATGCATCTACCAGTGCTCtcattttcccagtcagaggacctgaaatcacatgagagaatagagaggctGTGTTCTGACTTGTGTTATTGACCTGAGAATTTAGGTTTTTGTTTATGCCAAATGAAATCATATTGTTAACATGAAATCATTAACAAAATAGACCTACTCTTTTAGAGTTTTCATCTGGAGATGATAAATACTACCATTCATCCATTGCATACGAGTATAAACCCTCTAATATTGTTCATTATGTTTTGGGGATATTGCTAAATGTTCATTATTATATGGAGTTTTggatttcaatgtttttttttcaccttta
>TU1293905
gttactgtgaaagaagaggaagactcgttcagagtgaaagaggaggaggatgttacagtgaaagaagaggaggaagagcaaGAGGCGAAtgcaggagaggagggggagatgactgtcacattgaaagaagacgacgaggaggagacagaagatcTGATTAAGACCAGGGAGGGACCAGACTCCCACTCTGACAGCGGAAAGAGTCCTTCAGGGGAACCAGACCCAGAGACGCCCAAACCAGGGAGACaacaccactgctcccaatgtgaaAAGAGATTTTCCCAATCAGGGGACCTAAAACGGCATGAGaggatacacacaggggagaagcctttccaatgttcccagtgtggaaagtgttttaaCCGCTTAAGCAACCTGAAGGCGCATGAGAggatacacacacattatttccaatgttcccagtgtgggaaGCGTTTTGCCTGCTTAAGCAGGCTGAAgaggcatgagaggacacacacaggggaaaagcctttccaa

Function

NR:

description
zinc finger protein 121

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036942274.1 False 1709 mRNA 0.45 2 1668582 1671456
TU1293905 True 501 TUCP 0.50 2 1669373 1671039

Neighbor

gene id symbol gene type direction distance location
LOC110506157 LOC106593263 coding downstream 103473 1562605 ~ 1565409 (-)
LOC110500808 LOC106592918 coding downstream 136653 1524636 ~ 1531929 (-)
LOC110500803 NA coding downstream 167618 1496985 ~ 1500964 (-)
LOC110500809 LOC106593733 coding downstream 178035 1484584 ~ 1490547 (-)
LOC110500910 NA coding downstream 185671 1476759 ~ 1482911 (-)
trnai-uau-3 NA coding upstream 38455 1709911 ~ 1710004 (-)
LOC110487338 NA coding upstream 48294 1719750 ~ 1734106 (-)
LOC118938418 NA coding upstream 69042 1740498 ~ 1742112 (-)
LOC110487301 LOC106595892 coding upstream 291086 1938873 ~ 1996032 (-)
LOC118938506 LOC106594488 coding upstream 331093 2002549 ~ 2010728 (-)
G1136258 NA non-coding downstream 26721 1641245 ~ 1641861 (-)
G1136247 NA non-coding downstream 40781 1627314 ~ 1627801 (-)
G1136225 NA non-coding downstream 57428 1576973 ~ 1611154 (-)
G1136222 NA non-coding downstream 58147 1596957 ~ 1610435 (-)
G1136221 NA non-coding downstream 91709 1569950 ~ 1576873 (-)
G1136301 NA non-coding upstream 89633 1761089 ~ 1776964 (-)
G1136311 NA non-coding upstream 143605 1815061 ~ 1842187 (-)
G1136318 NA non-coding upstream 145214 1816670 ~ 1817370 (-)
G1136321 LOC106607538 non-coding upstream 151533 1822989 ~ 1836548 (-)
G1136332 NA non-coding upstream 170763 1842219 ~ 1859230 (-)
LOC118938134 NA other downstream 213277 1454762 ~ 1458002 (-)
G1136112 NA other downstream 328980 1338663 ~ 1339602 (-)
LOC118938492 LOC106592651 other downstream 984120 661073 ~ 684462 (-)
LOC110515515 LOC106563994 other upstream 408690 2030808 ~ 2096917 (-)
G1136432 LOC106595012 other upstream 458262 2129718 ~ 2170439 (-)
G1136447 NA other upstream 500194 2171650 ~ 2187711 (-)
G1136455 NA other upstream 515984 2187440 ~ 2245318 (-)

Expression


Co-expression Network