Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938407 |
| gene name | LOC106593232 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 1829776 ~ 1840280 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger protein 287-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036942267.1 | False | 1362 | mRNA | 0.44 | 3 | 1829776 | 1840280 |
| XM_036942266.1 | False | 2161 | mRNA | 0.41 | 2 | 1829779 | 1836980 |
| XM_036942268.1 | True | 1254 | mRNA | 0.42 | 2 | 1829782 | 1840280 |
1,822,000
1,824,000
1,826,000
1,828,000
1,830,000
1,832,000
1,834,000
1,834,000
1,836,000
1,838,000
1,840,000
1,842,000
1,844,000
1,846,000
NC_048577.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938414 | LOC106607538 | coding | upstream | 5516 | 1815101 ~ 1824260 (+) |
| LOC110487324 | LOC106593751 | coding | upstream | 18382 | 1804077 ~ 1811394 (+) |
| LOC118938415 | LOC106607542 | coding | upstream | 38023 | 1759730 ~ 1791753 (+) |
| LOC118938392 | NA | coding | upstream | 75635 | 1746548 ~ 1755488 (+) |
| trnai-uau-2 | NA | coding | upstream | 148192 | 1681491 ~ 1681584 (+) |
| LOC110487167 | LOC106593224 | coding | downstream | 1711 | 1841991 ~ 1852974 (+) |
| LOC110487343 | NA | coding | downstream | 17723 | 1858003 ~ 1868433 (+) |
| LOC118938408 | LOC106594474 | coding | downstream | 17740 | 1858020 ~ 1878599 (+) |
| LOC118938410 | LOC106592292 | coding | downstream | 41341 | 1881621 ~ 1888989 (+) |
| LOC110487319 | LOC106592850 | coding | downstream | 60807 | 1901087 ~ 1905320 (+) |
| G1135568 | NA | non-coding | upstream | 7361 | 1819428 ~ 1822415 (+) |
| G1135565 | NA | non-coding | upstream | 22106 | 1806559 ~ 1807670 (+) |
| G1135558 | NA | non-coding | upstream | 52855 | 1761068 ~ 1776921 (+) |
| G1135559 | NA | non-coding | upstream | 53130 | 1771598 ~ 1776646 (+) |
| G1135590 | NA | non-coding | downstream | 31298 | 1871578 ~ 1872265 (+) |
| G1135593 | NA | non-coding | downstream | 33339 | 1873619 ~ 1876060 (+) |
| G1135598 | NA | non-coding | downstream | 50192 | 1890472 ~ 1891563 (+) |
| G1135600 | NA | non-coding | downstream | 56662 | 1896942 ~ 1897161 (+) |
| G1135455 | LOC106607538 | other | upstream | 6224 | 1804373 ~ 1823552 (+) |
| LOC118938396 | LOC106595654 | other | upstream | 204300 | 1623073 ~ 1627806 (+) |
| G1135355 | NA | other | upstream | 443973 | 1382438 ~ 1385803 (+) |
| G1135135 | NA | other | upstream | 524405 | 1302239 ~ 1305371 (+) |
| G1135108 | NA | other | upstream | 889765 | 875652 ~ 1318383 (+) |
| LOC118938404 | LOC106594479 | other | downstream | 74591 | 1914705 ~ 1935643 (+) |
| G1135625 | NA | other | downstream | 160029 | 2000309 ~ 2068901 (+) |
| G1135672 | NA | other | downstream | 472573 | 2282956 ~ 2429608 (+) |
| G1136602 | LOC106613263 | other | downstream | 743017 | 2583297 ~ 2584334 (+) |
| G1136609 | NA | other | downstream | 759728 | 2600008 ~ 2602694 (+) |
