Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938423 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 2000842 ~ 2002464 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035704.1 | False | 283 | mRNA | 0.36 | 4 | 2000991 | 2001625 |
| TU1293606 | True | 1065 | lncRNA | 0.40 | 4 | 2000842 | 2002464 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938395 | LOC106594479 | coding | upstream | 39372 | 1942017 ~ 1961619 (+) |
| LOC118938404 | LOC106594479 | coding | upstream | 65348 | 1914705 ~ 1935643 (+) |
| LOC110487319 | LOC106592850 | coding | upstream | 95671 | 1901087 ~ 1905320 (+) |
| LOC118938410 | LOC106592292 | coding | upstream | 112002 | 1881621 ~ 1888989 (+) |
| LOC118938408 | LOC106594474 | coding | upstream | 122392 | 1858020 ~ 1878599 (+) |
| LOC118938402 | LOC106612417 | coding | downstream | 112529 | 2114154 ~ 2119737 (+) |
| LOC118938397 | LOC106612417 | coding | downstream | 148438 | 2150063 ~ 2156275 (+) |
| LOC110512827 | LOC106612417 | coding | downstream | 204329 | 2205954 ~ 2213834 (+) |
| LOC118938398 | LOC106612417 | coding | downstream | 267022 | 2268647 ~ 2276355 (+) |
| LOC110513807 | NA | coding | downstream | 296199 | 2297824 ~ 2398152 (+) |
| G1135615 | LOC106593708 | non-coding | upstream | 20722 | 1974516 ~ 1980269 (+) |
| G1135616 | NA | non-coding | upstream | 23991 | 1975947 ~ 1977000 (+) |
| G1135614 | NA | non-coding | upstream | 27925 | 1972859 ~ 1973066 (+) |
| G1135600 | NA | non-coding | upstream | 103830 | 1896942 ~ 1897161 (+) |
| G1135637 | NA | non-coding | downstream | 28207 | 2029832 ~ 2030653 (+) |
| G1135625 | NA | non-coding | downstream | 32937 | 2000309 ~ 2068901 (+) |
| G1135658 | NA | non-coding | downstream | 102342 | 2103967 ~ 2104502 (+) |
| G1135689 | NA | non-coding | downstream | 163331 | 2164956 ~ 2181047 (+) |
| G1135672 | NA | non-coding | downstream | 281331 | 2282956 ~ 2429608 (+) |
| G1135455 | LOC106607538 | other | upstream | 177439 | 1804373 ~ 1823552 (+) |
| LOC118938396 | LOC106595654 | other | upstream | 375515 | 1623073 ~ 1627806 (+) |
| G1135355 | NA | other | upstream | 615188 | 1382438 ~ 1385803 (+) |
| G1135135 | NA | other | upstream | 695620 | 1302239 ~ 1305371 (+) |
| G1136602 | LOC106613263 | other | downstream | 581672 | 2583297 ~ 2584334 (+) |
| G1136609 | NA | other | downstream | 598383 | 2600008 ~ 2602694 (+) |
| G1136633 | NA | other | downstream | 651736 | 2653361 ~ 2656653 (+) |
| G1136677 | LOC106564039 | other | downstream | 726656 | 2728281 ~ 2732015 (+) |
