Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938422 |
| gene name | LOC106594299 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 2103128 ~ 2104021 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger protein 883-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035703.1 | False | 195 | mRNA | 0.51 | 3 | 2103234 | 2104021 |
| TU1294644 | True | 233 | lncRNA | 0.56 | 2 | 2103128 | 2103495 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110515515 | LOC106563994 | coding | downstream | 6317 | 2030808 ~ 2096917 (-) |
| LOC118938506 | LOC106594488 | coding | downstream | 92506 | 2002549 ~ 2010728 (-) |
| LOC110487301 | LOC106595892 | coding | downstream | 107202 | 1938873 ~ 1996032 (-) |
| LOC118938418 | NA | coding | downstream | 361122 | 1740498 ~ 1742112 (-) |
| LOC110487338 | NA | coding | downstream | 369128 | 1719750 ~ 1734106 (-) |
| LOC118938405 | NA | coding | upstream | 24911 | 2128932 ~ 2141322 (-) |
| LOC118938409 | NA | coding | upstream | 60976 | 2164997 ~ 2170791 (-) |
| LOC110513814 | LOC106564064 | coding | upstream | 90101 | 2194122 ~ 2243480 (-) |
| LOC118938412 | LOC106564064 | coding | upstream | 147631 | 2251652 ~ 2259183 (-) |
| LOC118936483 | NA | coding | upstream | 180634 | 2284655 ~ 2292145 (-) |
| G1136419 | NA | non-coding | downstream | 3232 | 2099525 ~ 2100002 (-) |
| G1136417 | NA | non-coding | downstream | 8063 | 2093726 ~ 2095171 (-) |
| G1136416 | NA | non-coding | downstream | 11620 | 2090487 ~ 2091614 (-) |
| G1136398 | NA | non-coding | downstream | 100770 | 2000877 ~ 2002464 (-) |
| G1136444 | NA | non-coding | upstream | 52307 | 2156328 ~ 2214265 (-) |
| G1136446 | NA | non-coding | upstream | 60661 | 2164682 ~ 2180431 (-) |
| G1136447 | NA | non-coding | upstream | 67629 | 2171650 ~ 2187711 (-) |
| G1136448 | NA | non-coding | upstream | 69103 | 2173124 ~ 2174163 (-) |
| G1136481 | NA | non-coding | upstream | 104029 | 2208050 ~ 2208717 (-) |
| LOC110487328 | NA | other | downstream | 432195 | 1668582 ~ 1671456 (-) |
| LOC110506157 | LOC106593263 | other | downstream | 537825 | 1562605 ~ 1565409 (-) |
| LOC110500808 | LOC106592918 | other | downstream | 571726 | 1524636 ~ 1531929 (-) |
| G1136432 | LOC106595012 | other | upstream | 25697 | 2129718 ~ 2170439 (-) |
| G1136455 | NA | other | upstream | 83419 | 2187440 ~ 2245318 (-) |
| LOC118938509 | LOC106564044 | other | upstream | 404242 | 2507219 ~ 2518648 (-) |
| G1136568 | NA | other | upstream | 417806 | 2521827 ~ 2522361 (-) |
