LOC118938409


Basic Information

Item Value
gene id LOC118938409
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 2164997 ~ 2170791 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036942271.1
aacaacaaggcgcaaactctttcaaccacctcggtagcttgctagacaaCATAAAACTAAAAGATTGATTCTTTAGACCATGTTATTGTACATTAgctaatctcagtgttttaaacaAATTTCGGTTGACGTATCTACTGGTTAAATTTAACCTAATGTGCTTGTTCAATTTGCAAACTTGTTAAAGATTGATACTGAGGTtagcactaggctagtcgctaatgctagctagctagctaacatccctgaccatgagctcactGAACTACTCCTCCCTTGCTAATGAAGCGGAGGTCTGCTGTACGGAGAAAGAATCTTTCAGAATTAAAAAGGAGGAaaaggaggctgttatagtgaaagaaccttttagagaggaagaggatgctatCTTAATAAAcgtgaaggaggaagacgttttgaGAGTGAAAAAGGAGGAGACAGAAGATCCGATtgacaccagagagagacatgactatggtggatcctctgcggagcctcaacaacatcctgatgctgacgaggcagagaagagtctttccagatcagaacaccagatggacaacgctagcccttccaCCCTGTGTCGTGCCTCTCTgggtagcaccttactgctgggtatgaagaggttgtctgtgctgctggtggactgcaggaaaacaacagggctgagtggaactgtgagaggaggagaagagatgaaaggatcagatttgactcatcaaaGAGAAAAACCAGACTCAGAGGAACCAAAGCCATGGACTTCCAAACCAGCAAGAAGACACCAgtgttcccactgtggaaagggttgGAACAAGTTAAGTGAGCTtaaacgacatgagagaatacacacaggggagaagccttaccactgctcccagtgtggaaagggttttaatgATTTGGGGAatctgaaacgacatgagagaatacacaaaGGGCAGAAGCctcaccactgctcccagtgtggaaagggttgtaAAGATTTGGGGAAGCTGAAACGACACGTGAgcatacacacaggggagaagccttaccactgctcccagtgtggaaagggttttaatgATTTGGGGAATctgaaaagacatgagagaaTGCACACatgggagaagccttaccactgctcccagtgtggaaagtgtttcacctGGGCATGGAATCTGAAAcagcacgagagaatacacacaggggagaagccttaccaatgctcccagtgtggaaagtttTTCGTCTCGGCAAGGTATCTGAAAcagcacgagagaatacacacaggggagaagccttaccactgctcccagtgtggcaagtgtttcaACGGGGCAGGGGATCTTAAAAAACACGAAagaatacatacaggagagaagccttaccactgctcccactgtggcAAGTGTTTTAACCAGTTAGGGGCTGTGAAAcagcacgagagaatacacacaggggagaagcctgctcccagtgtggcaagtgttttaaCCAGTTAGGGACCCTGAAACAACACAAgataatacacacaggggagatgcattaccactcctcccaggatgcaaagcttttgcccatttaggaagcctgaaagagCATGACACAGAGGAGAAAGCTTTACAGAAGATTAGATTTTGGGAAAACATATTACTCATAACAATCACTTAAACATCATTAGAGAatctacacaggagagagaaattacttctctttgcatgtatattgatatttcactttttttttcaCATCTCATTTTTCTTACAATTCATCAGAtaacatacacagtgctcccgttgtcttatattgttgCCTTATAATGTGTTGACCCGTTTTTACcagatgaaattgcttcttccaattattgattaACATGTtgtacctgttaagaaactgactgttagaactgttaaggctccatggattgatgaggaatttaaaaactgtatgtTTGAAAGAGTTGGGGCTAAAGGAgcggctaataagtctggctggcttacatactgcaaattgagaaatgatgtgaccaaactcaacaaaaataatcaactttattatgaagccaaatcaatgatataaagaatgatgg

Function

NR:

description
zinc finger protein 345-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036942271.1 True 2071 mRNA 0.43 4 2164997 2170791

Neighbor

gene id symbol gene type direction distance location
LOC118938405 NA coding downstream 23675 2128932 ~ 2141322 (-)
LOC118938422 LOC106594299 coding downstream 60976 2103128 ~ 2104021 (-)
LOC110515515 LOC106563994 coding downstream 68080 2030808 ~ 2096917 (-)
LOC118938506 LOC106594488 coding downstream 154269 2002549 ~ 2010728 (-)
LOC110487301 LOC106595892 coding downstream 168965 1938873 ~ 1996032 (-)
LOC110513814 LOC106564064 coding upstream 23331 2194122 ~ 2243480 (-)
LOC118938412 LOC106564064 coding upstream 80861 2251652 ~ 2259183 (-)
LOC118936483 NA coding upstream 113864 2284655 ~ 2292145 (-)
LOC118938507 NA coding upstream 165492 2336283 ~ 2375402 (-)
LOC118938413 NA coding upstream 180944 2351735 ~ 2360192 (-)
G1136419 NA non-coding downstream 64995 2099525 ~ 2100002 (-)
G1136417 NA non-coding downstream 69826 2093726 ~ 2095171 (-)
G1136416 NA non-coding downstream 73383 2090487 ~ 2091614 (-)
G1136447 NA non-coding upstream 859 2171650 ~ 2187711 (-)
G1136448 NA non-coding upstream 2333 2173124 ~ 2174163 (-)
G1136481 NA non-coding upstream 37259 2208050 ~ 2208717 (-)
G1136475 NA non-coding upstream 86292 2257083 ~ 2257797 (-)
G1136489 NA non-coding upstream 97476 2268267 ~ 2296934 (-)
LOC110487328 NA other downstream 493958 1668582 ~ 1671456 (-)
LOC110506157 LOC106593263 other downstream 599588 1562605 ~ 1565409 (-)
LOC110500808 LOC106592918 other downstream 633489 1524636 ~ 1531929 (-)
G1136455 NA other upstream 16649 2187440 ~ 2245318 (-)
LOC118938509 LOC106564044 other upstream 337472 2507219 ~ 2518648 (-)
G1136568 NA other upstream 351036 2521827 ~ 2522361 (-)
G1136948 NA other upstream 688240 2859031 ~ 2860041 (-)

Expression


Co-expression Network