LOC118938413


Basic Information

Item Value
gene id LOC118938413
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 2351735 ~ 2360192 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036942284.1
GGACGGGACGCTTCTTCAAGAACAACGAGGCGCCAACTCTTTCAACCACCTCGGTAGCCTGCTAGACAacataaaactgaaagattgaTTCTTTAGACCATGTTATTGTACATTAGCTAATCTCAGTGTTTTAGACAAATTTCGGTTGACGTATCTACTGGTGAACTTTAACCTAATGTGCTTGTTCAATTTGCAAACTTGTTAAAGATTGATACTGAGGTtagcactaggctagtcgctaatgctagctagctagctagctaacatccctgaccatgagctcactGAACTACTCCTCCCTTGCTAATGAAGCGGAGGTCTGCTGTTTGGAGAAAGAatctttcagaatgaaaaaggaggaagaggaggctgttatagtgaaagaagagaaagaacctttcagagaggaagaggatgctatCTTAATAAACGTGAGGGATGAAGACGTTTTGAGAGTGAAAAAGGAGGAGACAGAAGATCCGATTGACACCAgagagagacatgactttcgtggatcctctggggagcctcaacaacatcctgatgctgacgaggcagagaagagtctctccagatcagaacaccagatggacaacgctagcccttcctccctcccggagtccctGTATCGTACCTCTCCCGGTAGCACCTTACtactgggtatgaagaggttgtctgtgctgctggtggactgcaggaaaacaacggggctgagtggaactgtgagaggaggagaagagatgaaaggatcagatttgaatcaaagagaaagaccagactcaGTGGAACCAGAGCGAGggacgtccaaaccagcaagaAGACATCAGTGCTCCTACTGTGGAAAGGGTTGTAACTGGTTAGGGGACCTGAAAccgcatgagagaatacacactggggagaagccttaccactgctcgcagtgtggaaagtgtttcagccGGTCAGGACACCTGAAAACTCATGAGctaatacacacaggggagaagccttaccgctgctcccagtgtggaaagtgtttcaaccaatCAGGACACCTGAAAACTCATGAGctaatacacacaggggagaagccttaccactgctcccagtgtggaaagtgtttcaaagGGTCAGTTTATCTGAAAAAACatgaaagaatacacacaggagagaagccttaccactgctcctaCTGTGGAAAGGGTTGTTACTGGTTATgggacctgaaacaacatgagagaatacacacgggggagaagccttaccactgctcccagtgtggcaagtgtttcaACGGGTCAGGGggcctgaaacaacatgagagaatacacacagggaagaagccttaccactgctcccagggtgcaaaacatttgcccatttaggaagcctgaaagaacatgagacacagaggagaaggcTTTACAGAAGATTCGATTTTGGGAAAACATATTACTTATAACAATCACTTAAACGTCAttagagaatccacacaggagagagaaattacttctcttagcatgtatattgatatttcacatctCATTGACTCACAACTCATCAGAGAACATGCACAGTGCTCCCATTGTCTTATAGTGTTGACTGATAATGTGTTTACCTACatcatgaaagaaaagcagtgcaagtatcgaattttgtaaagttagtgtgggagaggtggaaaaattgttagcgatcaataatgacaaacctcctggcattgacaacttagatggaaagctactga

Function

NR:

description
zinc finger protein 345-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036942284.1 True 1726 mRNA 0.45 4 2351735 2360192

Neighbor

gene id symbol gene type direction distance location
LOC118936483 NA coding downstream 59590 2284655 ~ 2292145 (-)
LOC118938412 LOC106564064 coding downstream 92552 2251652 ~ 2259183 (-)
LOC110513814 LOC106564064 coding downstream 108255 2194122 ~ 2243480 (-)
LOC118938409 NA coding downstream 180944 2164997 ~ 2170791 (-)
LOC118938405 NA coding downstream 210413 2128932 ~ 2141322 (-)
LOC110518365 NA coding upstream 19904 2380096 ~ 2431119 (-)
LOC118938508 NA coding upstream 84251 2444443 ~ 2468862 (-)
LOC110493356 LOC106592333 coding upstream 121416 2481608 ~ 2492020 (-)
LOC110487163 LOC106564056 coding upstream 137102 2497294 ~ 2503751 (-)
LOC118938509 LOC106564044 coding upstream 147027 2507219 ~ 2518648 (-)
G1136494 NA non-coding downstream 44403 2279083 ~ 2307332 (-)
G1136489 NA non-coding downstream 54801 2268267 ~ 2296934 (-)
G1136475 NA non-coding downstream 93938 2257083 ~ 2257797 (-)
G1136481 NA non-coding downstream 143018 2208050 ~ 2208717 (-)
G1136448 NA non-coding downstream 177572 2173124 ~ 2174163 (-)
G1136565 NA non-coding upstream 160606 2520798 ~ 2521112 (-)
G1136783 NA non-coding upstream 163714 2523906 ~ 2536759 (-)
G1136788 LOC106564059 non-coding upstream 170283 2530475 ~ 2556166 (-)
G1136789 NA non-coding upstream 196264 2556456 ~ 2556728 (-)
G1136455 NA other downstream 106417 2187440 ~ 2245318 (-)
G1136447 NA other downstream 164024 2171650 ~ 2187711 (-)
G1136432 LOC106595012 other downstream 181296 2129718 ~ 2170439 (-)
LOC110515515 LOC106563994 other downstream 254851 2030808 ~ 2096917 (-)
LOC110487301 LOC106595892 other downstream 366332 1938873 ~ 1996032 (-)
G1136568 NA other upstream 161635 2521827 ~ 2522361 (-)
G1136948 NA other upstream 498839 2859031 ~ 2860041 (-)
G1137174 NA other upstream 769421 3129613 ~ 3130553 (-)
LOC110514041 LOC106585204 other upstream 801087 3161191 ~ 3197982 (-)

Expression


Co-expression Network