LOC110518365


Basic Information

Item Value
gene id LOC110518365
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 2380096 ~ 2431119 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110518365
CCACTTATTtgagctgaaacaacatgagagaatacacactggggagaagccttaccactgctcccagtgtggaaagagttttaaccagaAAGGAAACCTGAAAactcatgagagaatacacacaaggGGGAAGCCTTACCGCTGCATGCAGTGTGGAAAGATTTTTAACGATTTGGGAAAGCTGGAAcggcacgagagaatacacagaggggagaagccttaccactgctcccagtgtggaaagcgttTTAACGATTTGGGGAAGCTGGAAcggcacgagagaatacacagaggggagaagccttaccactgctcccagtgtggaaagggttgtaACGATTTGGGGACGCTGAAacgacacgagagaatacacacaggggagaagccttaccactgctcccactgtggaaagcgTTTTAACGATTTGTGGAAggtgaaacgacatgagagaatacacacaggggagaagccttaccactgctcccactgtggaaagtgtttcaaccagtcaggggagctgaaacgacatgagagaatacacacaggggagaagcctatgcacacaggggagaagccttaccactgctcccactgtggaaagtgTTTCGTCCAGTCAGGGGagctgaaacgacatgagagaatacacacaggggagaagccttaccactgcttgCAATGTGAAAAGATGTATAGGCGGAAAGGACACCTAAAAGCTCACGAGAAAattcatacaggggagaagccttaccaatgctcccagtgtggaaagtgtttcacctGGGCAGGGGATCTGAAAAAACAcgaaagaatacacacaggggaaaagccttacccctgctcccagtgtggcaagtgtttcaATGAGACAGGGGATCTGAAAAAACAcgaaagaatacacacaggggagaagccttacccctGCTCCCATTGTGGCAAGTGTTTTAACCAGTTAGGGGCCCTGAAACAgcacaagagaatacacacaggggagaagctttaccactgctcccagtgtggcaagtgttttaaCCAGTTAGGGACCCTGAAACAGCACAAGAtcatacacacaggggagatgcATTACCACTCCTCCCAGGGCGCAAAGCAtttgcccattgacaacgctagcccttccaCCCTGTGTCGTGTCTCTCTgggtagcaccttactgctgggtatgaagaggttgtctgtgctgctggtggactgcaggaaaacaacagggctgagtggaactgtgagaggaggagaagagatgaaaggatcagatttgactcatcaaagagaaagaccagactcagaggaaccagagccagggacgtACAAACCAGCAAGAAGACACCAgtgttcccactgtggaaagggttatAACCACTTAAATGAGCTTAAacgacacgagagaatacacacaggggagaagccttaccactgttcccagtgtggaaagggttttaacgATTTGGGAAAGCTGAAACGACACgggagaatacacacaggggataagccttaccactgctcccagtgtggaaggcGTTTTAACGATTTGGGGAAGCTGGAacgacacgagagaatacacagaggggagaagccttaccactgctcccagtgtggaaagggttgtaACGATTTGGGGAAGCTGAAacgacacgagagaatacacacgggtgaaaagccttaccactgctcccactgcGGAAAGCGTTTTAACGATTTGGGCAAggtgaaacgacatgagagaatacacacaggggagaagccttaccattgctcccactgtggaaagtgtttcaaccagttaGGGACCCTGAAACAGCACAAGgtaatacacacaggggagaatcgttaccactgctcccagtgtggaaagggttttaacgATTTGGGGAagctgaaacgacatgagagaatacacacaggggagaagccttaccattgCTCGCAATGTGAAAAGATGTATAGCGAGAAAGGACACCTGAAAGCCCATGAGAaaattcacacaggggagaagccttaccaatgctcccagtgtggaaagtgtttcacctGGGCAGGGTATCTGAAAAAACAcgaaagaatacacacaggggagaagccttaccactgctcccagtgtggcaagtgtttcaACGGGGCAGGGGATCTGAAAAAACACGAAagaatacatacaggagagaagccttaccactgctcccgcTGTGTCAAGTGTTTTAACCAGTTAGGGGCCCTGAAAcagcacgagagaatacacacaggggagaagccttaccactgctcccagtgtggcaagtgttttaaCCAGTTAGGGACCCTGAAACAGCACAAgataatacacacaggggagatgcattaccactcctcccaggatgcaaagcttttgcccAGAACACACTTTCACAACCCTCCCAAACCTCTCTACAACATCCCCAACAAACACCTTCACAACCCTCCCAAACCTCTCTACAACATCCCCAACAAACACCTTCACAACCCTCCTAAACCTCTCTACAACATTCCCAACAAACACCTTCACAACCCTCCCAAACCTCTCTACAACATCCCCAAACACCTCCACAACCCTCACAAAATCCCCAAACACCTCCACAACCCTCACAAACGTCTCTACAACATCCTGACATCTGAAGATATCAGTGGTCACTCTTCATCAAGAGCAGGTTCCACACTTCCCTTCCTCCGCTTCTTTGTCACCGGCTCCACACCTCTTGATGGCCGGGCGGGGGTAGGTGTGGTGCCGGAGACAGCAGGGGTCCGGCTGGATggaccagcttcagtgggggatctGCACCTTGGCAgagaaagaccagactcGGTGGATccagagccagggacgtccaaaccagcaagaAGACACCagtgctcccactgtggaaagggttgtaACCGGTTTTgggacctgaaacaacatgagaaaatacacacaggggagaagtcttaccactgctcccagtgtggaaatagTTTTAAAGATTTAGTGaacctgaaacaacatgaaaAGCCTTAtcactgttcccagtgtggaaagtgtttcagccAGTCATCGGACCTGAAACGGCACGAGAAAAttcacaggggagaagccttaccactgctcccagtgtggcaagtgttttaaCCGGGTAGGgaacctgaaacaacatgagaaaattcacacaggggagaagcctttccactgctcccagtgtggaaagtgttttagCCAGTCATTGGACCTGAAACGGCACGAGAgaattcacacaggggagaagcctttccactgctcccagtgtggaaagtgtttcagccAGTCATTGGACCTGAAACGGCACGAGAgaattcacacaggggagaagcctttccactgctcccagtgtgggaagTGTTTCAGCCAGTCATCGGACCTGAAACGGCATGAGAAAATCCACACAAGGGAGaggccttaccactgctcccagtgtggcaagtgttttaaCCGGGTAGGGAACCTGAAACGGCACGAGAgaattcacacaggggagaagcctttccactgctcccagtgtgcaaAGTGTTTCCGCCAGTCATTGGACCTGAAACGGCACGAGAgaattcacacaggggagaagcctttccactgctccctGTGTGGCAAGTGTTTCGCCCAGTTAGTGAATCTGAAACAGCACAATCTagtacacacaggggagaagcctttccactgctccctGTGTGGCAAGTGTTTCACCCAGTTAGGGAATCTGAAACAGCATGAGCTagtacacacaggggagaagcctttccactgctcccagtgtggcaagtgtttcaACCGGTCAGGACAACTGAAAGTTCATGAGCTtgtacacacaggggagaagccttaccactgctccttgtgtggcaagtgttttaaccagttaaggaatctgaaacaacatgagctagtacacacaggggagaagccataccactgctcccagtgtggcaagtgtttcaAACATTCGGGGGATCTGAAAAATCAcgaaagaatacacacaggggagaatcCTTACCACTCCTCCCGGTGTGCAAAGCAtttgcccatttaggaagcctgaaagagCATGACACAGAGGAGAAGGCTTTACAGAAGATTAGACTTTGGGAAAACATATTACTCATAACAATCACTTAAACGTCACTcgagaatccacacaggagagagaaattacttctcttagcgtgtatatattgatatttcacatctCATTTTTCTTacaattcatcagagaacatacacagtgctcccgttgtcttatattgttgactgaTAATGTGTTTACCTGTTTTTACCAGAttaaattgcttcttccaattattgataaacatgtacctgttaagaaactgactgttagatatgttaaggctccatggattgatgaggaattaaaaaaCTGTATGTTTGAAAGAGTTGGGGCAAAAGgggtggctaataagtctggctgcacatctggctGGCTGTTttactgtaaattgagaaattatgtgaccaaactcaacaaaaataatatgttttattatgaagccaagatcaatgatataaagaatg

Function

NR:

description
zinc finger protein 721-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110518365 True 4561 mRNA 0.48 6 2380096 2431119

Neighbor

gene id symbol gene type direction distance location
LOC118938507 NA coding downstream 4694 2336283 ~ 2375402 (-)
LOC118938413 NA coding downstream 19904 2351735 ~ 2360192 (-)
LOC118936483 NA coding downstream 87951 2284655 ~ 2292145 (-)
LOC118938412 LOC106564064 coding downstream 120913 2251652 ~ 2259183 (-)
LOC110513814 LOC106564064 coding downstream 136616 2194122 ~ 2243480 (-)
LOC118938508 NA coding upstream 13324 2444443 ~ 2468862 (-)
LOC110493356 LOC106592333 coding upstream 50489 2481608 ~ 2492020 (-)
LOC110487163 LOC106564056 coding upstream 66175 2497294 ~ 2503751 (-)
LOC118938509 LOC106564044 coding upstream 76100 2507219 ~ 2518648 (-)
LOC110495017 LOC106564069 coding upstream 298680 2728631 ~ 2748424 (-)
G1136494 NA non-coding downstream 72764 2279083 ~ 2307332 (-)
G1136489 NA non-coding downstream 83162 2268267 ~ 2296934 (-)
G1136475 NA non-coding downstream 122299 2257083 ~ 2257797 (-)
G1136481 NA non-coding downstream 171379 2208050 ~ 2208717 (-)
G1136448 NA non-coding downstream 205933 2173124 ~ 2174163 (-)
G1136565 NA non-coding upstream 89679 2520798 ~ 2521112 (-)
G1136783 NA non-coding upstream 92787 2523906 ~ 2536759 (-)
G1136788 LOC106564059 non-coding upstream 99356 2530475 ~ 2556166 (-)
G1136789 NA non-coding upstream 125337 2556456 ~ 2556728 (-)
G1136455 NA other downstream 134778 2187440 ~ 2245318 (-)
G1136447 NA other downstream 192385 2171650 ~ 2187711 (-)
G1136432 LOC106595012 other downstream 209657 2129718 ~ 2170439 (-)
LOC110515515 LOC106563994 other downstream 283212 2030808 ~ 2096917 (-)
LOC110487301 LOC106595892 other downstream 394693 1938873 ~ 1996032 (-)
G1136568 NA other upstream 90708 2521827 ~ 2522361 (-)
G1136948 NA other upstream 427912 2859031 ~ 2860041 (-)
G1137174 NA other upstream 698494 3129613 ~ 3130553 (-)
LOC110514041 LOC106585204 other upstream 730160 3161191 ~ 3197982 (-)

Expression


Co-expression Network