LOC110487344 (LOC106594449)


Basic Information

Item Value
gene id LOC110487344
gene name LOC106594449
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 3387801 ~ 3406583 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036942259.1
TTCgtatttttccgagttcccagttgttttgaacgcatcATTTTCCTATAGCGAGTctgtgggtgtattcattacgcggATTCCGCTTCAAAAGCTCTcgtctgttgcaaaacgtttagtAACGGAAACCTTTCACTCCAAACGGAAAACATTTTACAACGAAAATAAATACATCTAGGTCCCTCCCCTTCGGCTCTGTTTGCTTCCGCGTAATGAATATACCCCTGGCAAGAAAGAAGTGAAATGAGAAGCTAGCTGTTTAGCTACCCGTCTGACTGCTCGGAAAAAAATGTCGACTTgtcttattagctagctagcataatcAAAACTAACTTTGGTAGAGCATCTATTCGGCAGTGATGTGATTTTCCAGCTTGGTTGCAACGGCCGTTATTCCCGAGGTAGGAAACTAAAGacccCAGATCATCCAGCAGATGGAGGGGGGTGCCGCTGCTGCCCCCGCCCCCAACCCTCTCTCCGATCTCTCCTCCCCCCTAACCCCTcctgtgacctctgacccctctccctctccgtaccCCCGGCCCTCTGCCAGCCCCTCCATCAGCGAAGACCAGTTTGGGTGCCACTGTTGCTACGACGTCCTGGTCAACCCGACAACGTTGAACTGTGGTCACAGCTTCTGCCGCCACTGCCTGGCTCTCTGGTGGGAGTCGAGTAGGAAGACTGAGTGCCCCGAATGCAGGGAGAAGTGGGAGGGCTTCCCCAAAGTCAACATCCTGCTGAGAGATGCAGTAGAGCGGTTGTTCTCAGAGGTGGTGGgtaggaggagagcagagatccAGGGGAACCCCAAGATCTCCCAGAGCCTGCTGGCCTTTCAGAGgTATGGTGATCAGGCAGCCAGAGGAATCCCCAAGACCAGTCctggtagaggagcaggagggttCTTCTCTGGAGTTCTCACTGCACTCACCTGTGTCGcgGTGATGTTTCTGGTGTACCACTGGTCCAGTGGGGATGGGGTCCATGACCTCTTGGTCAGTAAGCCTGTGTCAAAATGGACGCCGGAGGAGGTTCTGTTCTGGTTGGAACACCTTGGGGCCTGGACCTCTGTCTATAAAGAACCCTTCCTACAGGAGAACGTTAACGGACGGTTATTGTTGATGCTCGGTGATGAGGAGCTGACCAGAGCTCCCTATAACATAGACAACCAGGCCCATAGGAGAGCGATGATGGCTGAACTGGAGAGGATCAAGGAACTGGGGGTCAAGCCACCTCAGAACCTCTGGGAGTACAAGGCTGTGAATGCAGGTAAATCTCTGTTCCTGCTCTATGCTTTGAAGAGTTCTCCTCGCCTCAccatcctctacctctacctcttcgACTACTCCGAAACCTTCCTCCCCTTCCTGCACACCTGCTGCCCCGCCCTCTCACGCGCCAGCAAGCCAATGGAGGACAGCCTCCCCCTCAACCACCAGgggCACCCCAGCTGGCGCCAGTGGGCGGAGTTCCTAGTTAAGTACCTCCTCCTTCCGTACCAGCTGATCGCTGAGTTTGCCTGGGATTGGCTGTCGGTTCACTACTGGACGTCACGGTTCATCATCGTCAACGCCATGCTGCTGTCTGTGCTGGAGGGCTGTGTCCTGTGGAGGTTCTATAACCGAGCTGAGATCAGgAGTCTCCCTCAGAAGATGTGGGGTCACCTGTGGAGGATGTCCTCCCAGGGTTTTGCCTTCGCCCTGTTCTGGCCGGTGGTCCCTCAGTTTGTGTGTAACTGTCTGTTCTACTGGGCTCTGTATTTCAACCCCATCATCAACATAGACCTGGTGGTGCAGCAGCTAATGCACCCGGACACACGAGGGCCGTGAAGGACTGGCCGGCTCCCTACGttgtgcactacttctgaccagagtccctatggggtagtgcactacttctgaccagagtccctatggggtagtgcactactcctgaccagagtccctatggggtagtgcactacttctgaccagagtccctatggggtagtgtacta
>XM_036942257.1
tttttccgagttcccagttgttttgaacgcatcATTTTCCTATAGCGAGTctgtgggtgtattcattacgcggATTCCGCTTCAAAAGCTCTcgtctgttgcaaaacgtttagtAACGGAAACCTTTCACTCCAAACGGAAAACATTTTACAACGAAAATAAATACATCTAGGTCCCTCCCCTTCGGCTCTGTTTGCTTCCGCGTAATGAATATACCCCTGGCAAGAAAGAAGTGAAATGAGAAGCTAGCTGTTTAGCTACCCGTCTGACTGCTCGGAAAAAAATGTCGACTTgtcttattagctagctagcataatcAAAACTAACTTTGGTAGAGCATCTATTCGGCAGTGATGTGATTTTCCAGCTTGGTTGCAACGGCCGTTATTCCCGAGacccCAGATCATCCAGCAGATGGAGGGGGGTGCCGCTGCTGCCCCCGCCCCCAACCCTCTCTCCGATCTCTCCTCCCCCCTAACCCCTcctgtgacctctgacccctctccctctccgtaccCCCGGCCCTCTGCCAGCCCCTCCATCAGCGAAGACCAGTTTGGGTGCCACTGTTGCTACGACGTCCTGGTCAACCCGACAACGTTGAACTGTGGTCACAGCTTCTGCCGCCACTGCCTGGCTCTCTGGTGGGAGTCGAGTAGGAAGACTGAGTGCCCCGAATGCAGGGAGAAGTGGGAGGGCTTCCCCAAAGTCAACATCCTGCTGAGAGATGCAGTAGAGCGGTTGTTCTCAGAGGTGGTGGgtaggaggagagcagagatccAGGGGAACCCCAAGATCTCCCAGAGCCTGCTGGCCTTTCAGAGgTATGGTGATCAGGCAGCCAGAGGAATCCCCAAGACCAGTCctggtagaggagcaggagggttCTTCTCTGGAGTTCTCACTGCACTCACCTGTGTCGcgGTGATGTTTCTGGTGTACCACTGGTCCAGTGGGGATGGGGTCCATGACCTCTTGGTCAGTAAGCCTGTGTCAAAATGGACGCCGGAGGAGGTTCTGTTCTGGTTGGAACACCTTGGGGCCTGGACCTCTGTCTATAAAGAACCCTTCCTACAGGAGAACGTTAACGGACGGTTATTGTTGATGCTCGGTGATGAGGAGCTGACCAGAGCTCCCTATAACATAGACAACCAGGCCCATAGGAGAGCGATGATGGCTGAACTGGAGAGGATCAAGGAACTGGGGGTCAAGCCACCTCAGAACCTCTGGGAGTACAAGGCTGTGAATGCAGGTAAATCTCTGTTCCTGCTCTATGCTTTGAAGAGTTCTCCTCGCCTCAccatcctctacctctacctcttcgACTACTCCGAAACCTTCCTCCCCTTCCTGCACACCTGCTGCCCCGCCCTCTCACGCGCCAGCAAGCCAATGGAGGACAGCCTCCCCCTCAACCACCAGgggCACCCCAGCTGGCGCCAGTGGGCGGAGTTCCTAGTTAAGTACCTCCTCCTTCCGTACCAGCTGATCGCTGAGTTTGCCTGGGATTGGCTGTCGGTTCACTACTGGACGTCACGGTTCATCATCGTCAACGCCATGCTGCTGTCTGTGCTGGAGGGCTGTGTCCTGTGGAGGTTCTATAACCGAGCTGAGATCAGgAGTCTCCCTCAGAAGATGTGGGGTCACCTGTGGAGGATGTCCTCCCAGGGTTTTGCCTTCGCCCTGTTCTGGCCGGTGGTCCCTCAGTTTGTGTGTAACTGTCTGTTCTACTGGGCTCTGTATTTCAACCCCATCATCAACATAGACCTGGTGGTGCAGCAGCTAATGCACCCGGACACACGAGGGCCGTGAAGGACTGGCCGGCTCCCTACGttgtgcactacttctgaccagagtccctatggggtagtgcactacttctgaccagagtccctatggggtagtgcactactcctgaccagagtccctatggggtagtgcactacttctgaccagagtccctatggggtagtgtact

Function

NR:

description
PREDICTED: bifunctional apoptosis regulator-like

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K15684 BFAR; bifunctional apoptosis regulator

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036942259.1 False 1999 mRNA 0.54 9 3387801 3406583
XM_036942257.1 True 1978 mRNA 0.54 9 3387802 3406577

Neighbor

gene id symbol gene type direction distance location
LOC118938420 NA coding downstream 2760 3382292 ~ 3385041 (-)
LOC118938390 LOC106585183 coding downstream 17074 3353166 ~ 3370727 (-)
LOC110519358 LOC106564100 coding downstream 46074 3337677 ~ 3341727 (-)
LOC110514041 LOC106585204 coding downstream 189819 3161191 ~ 3197982 (-)
LOC118938425 NA coding downstream 225486 3161646 ~ 3162575 (-)
LOC110487174 LOC106594426 coding upstream 7439 3414022 ~ 3420121 (-)
LOC110487303 LOC106593981 coding upstream 101699 3508282 ~ 3513160 (-)
LOC110487308 LOC106595461 coding upstream 115102 3521685 ~ 3532141 (-)
LOC110517154 LOC106594599 coding upstream 126925 3533508 ~ 3554061 (-)
LOC110524887 LOC106564116 coding upstream 166379 3572962 ~ 3584380 (-)
G1137412 NA non-coding downstream 20893 3366423 ~ 3366908 (-)
G1137435 NA non-coding downstream 52130 3334109 ~ 3335671 (-)
G1137401 NA non-coding downstream 116886 3270143 ~ 3270915 (-)
G1137395 NA non-coding downstream 119553 3260412 ~ 3268248 (-)
G1137461 NA non-coding upstream 33856 3440439 ~ 3447354 (-)
G1137483 NA non-coding upstream 60893 3467476 ~ 3467907 (-)
G1137487 NA non-coding upstream 64896 3471479 ~ 3471809 (-)
G1137472 LOC106594097 non-coding upstream 71122 3477705 ~ 3484262 (-)
G1137470 LOC106564092 non-coding upstream 72484 3479067 ~ 3480384 (-)
G1137174 NA other downstream 257248 3129613 ~ 3130553 (-)
G1136948 NA other downstream 527760 2859031 ~ 2860041 (-)
G1136568 NA other downstream 865440 2521827 ~ 2522361 (-)
LOC118938509 LOC106564044 other downstream 872883 2507219 ~ 2518648 (-)
G1137666 NA other upstream 325038 3731621 ~ 3733300 (-)
G1137672 LOC106595836 other upstream 358699 3765282 ~ 3765816 (-)
G1138151 LOC106606801 other upstream 988162 4394745 ~ 4421260 (-)
G1138232 NA other upstream 1212912 4619495 ~ 4620179 (-)

Expression


Co-expression Network