Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118938145 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 3701546 ~ 3702061 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035408.1 | False | 337 | mRNA | 0.43 | 3 | 3701546 | 3702061 |
| XR_005035409.1 | True | 317 | mRNA | 0.43 | 3 | 3701546 | 3702061 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118938144 | NA | coding | downstream | 1220 | 3698309 ~ 3705039 (-) |
| LOC110524887 | LOC106564116 | coding | downstream | 117166 | 3572962 ~ 3584380 (-) |
| LOC110517154 | LOC106594599 | coding | downstream | 147485 | 3533508 ~ 3554061 (-) |
| LOC110487308 | LOC106595461 | coding | downstream | 169405 | 3521685 ~ 3532141 (-) |
| LOC110487303 | LOC106593981 | coding | downstream | 188386 | 3508282 ~ 3513160 (-) |
| LOC118938513 | LOC106595758 | coding | upstream | 146631 | 3848692 ~ 3891054 (-) |
| LOC110493403 | LOC106580921 | coding | upstream | 204830 | 3906891 ~ 3920631 (-) |
| LOC110512903 | LOC106564302 | coding | upstream | 290310 | 3992371 ~ 4018609 (-) |
| LOC110514885 | LOC106593640 | coding | upstream | 317157 | 4019218 ~ 4020526 (-) |
| LOC110487221 | dcaf15 | coding | upstream | 354972 | 4057033 ~ 4098713 (-) |
| G1137648 | NA | non-coding | downstream | 19919 | 3680745 ~ 3681627 (-) |
| G1137584 | NA | non-coding | downstream | 25095 | 3675687 ~ 3676451 (-) |
| G1137583 | NA | non-coding | downstream | 26122 | 3670904 ~ 3675424 (-) |
| G1137577 | NA | non-coding | downstream | 39715 | 3658358 ~ 3661831 (-) |
| G1137557 | NA | non-coding | downstream | 82636 | 3617298 ~ 3618910 (-) |
| G1137655 | NA | non-coding | upstream | 6932 | 3708993 ~ 3711132 (-) |
| G1137656 | NA | non-coding | upstream | 10134 | 3712195 ~ 3712934 (-) |
| G1137659 | NA | non-coding | upstream | 16591 | 3718652 ~ 3826196 (-) |
| G1137663 | NA | non-coding | upstream | 26236 | 3728297 ~ 3728704 (-) |
| G1137664 | NA | non-coding | upstream | 27017 | 3729078 ~ 3729765 (-) |
| LOC110514041 | LOC106585204 | other | downstream | 513362 | 3161191 ~ 3197982 (-) |
| G1137174 | NA | other | downstream | 570993 | 3129613 ~ 3130553 (-) |
| G1136948 | NA | other | downstream | 841505 | 2859031 ~ 2860041 (-) |
| G1136568 | NA | other | downstream | 1179185 | 2521827 ~ 2522361 (-) |
| G1137666 | NA | other | upstream | 29560 | 3731621 ~ 3733300 (-) |
| G1137672 | LOC106595836 | other | upstream | 63221 | 3765282 ~ 3765816 (-) |
| G1138151 | LOC106606801 | other | upstream | 692684 | 4394745 ~ 4421260 (-) |
| G1138232 | NA | other | upstream | 917434 | 4619495 ~ 4620179 (-) |
| G1138568 | NA | other | upstream | 1456104 | 5158165 ~ 5162954 (-) |
