LOC118938148


Basic Information

Item Value
gene id LOC118938148
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 4152927 ~ 4154217 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035410.1
AACATATGTGTGTGAAaacaagagagtgaaagagagagagagagtgccaggTGTGACTAGTTGTAACAGGTATGACTAGTTGTAACAGGTGTAACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGTGACTCGTTGTAACAGGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGACTCGTTGTAACAGCTGACTAGTTGTAACAGGTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGCTGACTAGTTGTAACAGGTGTGACTCGTTGTAACAGGTGACTAGTTGTAACAGGTGACTAATTGTAACAGGTGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGCTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGGTGACTAGTTGATAAGCCAGATGGTTGGGTGTGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGGTGACTAGTTGTAACAGCTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGACTAGTTGATAA
>TU1297011
GTGACTAGTTGTAACAGGTATGACTAGTTGTAACAGGTGTAACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGCTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGCTGACTAGTTGTAACAGGTGTGACTAGTTGTAACAGGTGACTAGTTGATAAGCCAGATGGTTGGGTGTGTGACTAGTTGTAACAGGTGACTAGTTGATAAGCCAGGGGGTTGGGTGTGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035410.1 False 775 mRNA 0.42 3 4153235 4154217
TU1297011 True 269 lncRNA 0.43 3 4152927 4154165

Neighbor

gene id symbol gene type direction distance location
LOC110493393 LOC105012066 coding downstream 517 4117764 ~ 4152718 (-)
LOC110485446 LOC106592110 coding downstream 38963 4098921 ~ 4114272 (-)
LOC110487221 dcaf15 coding downstream 54522 4057033 ~ 4098713 (-)
LOC110514885 LOC106593640 coding downstream 132709 4019218 ~ 4020526 (-)
LOC110512903 LOC106564302 coding downstream 134626 3992371 ~ 4018609 (-)
LOC118938149 LOC106564249 coding upstream 8521 4162738 ~ 4165860 (-)
LOC118938150 LOC106595636 coding upstream 16611 4170828 ~ 4185204 (-)
LOC110495043 LOC106564250 coding upstream 36020 4190237 ~ 4224638 (-)
LOC118938514 LOC106564252 coding upstream 82574 4236791 ~ 4237823 (-)
LOC118938533 LOC106564252 coding upstream 90100 4244317 ~ 4245773 (-)
G1138070 NA non-coding downstream 23648 4129210 ~ 4129587 (-)
G1138065 NA non-coding downstream 68639 4084295 ~ 4084596 (-)
G1138064 NA non-coding downstream 70290 4082580 ~ 4082945 (-)
G1138062 NA non-coding downstream 72201 4080814 ~ 4081034 (-)
G1138022 NA non-coding downstream 78530 4074185 ~ 4074705 (-)
G1138001 NA non-coding upstream 34075 4188292 ~ 4189370 (-)
G1138085 NA non-coding upstream 66569 4220786 ~ 4221203 (-)
G1138088 LOC106592176 non-coding upstream 72469 4226686 ~ 4227530 (-)
G1138101 NA non-coding upstream 99450 4253667 ~ 4253884 (-)
G1138104 NA non-coding upstream 110103 4264320 ~ 4264547 (-)
G1137672 LOC106595836 other downstream 387419 3765282 ~ 3765816 (-)
G1137666 NA other downstream 419935 3731621 ~ 3733300 (-)
LOC110487308 LOC106595461 other downstream 621111 3521685 ~ 3532141 (-)
LOC110514041 LOC106585204 other downstream 965051 3161191 ~ 3197982 (-)
G1137174 NA other downstream 1022682 3129613 ~ 3130553 (-)
G1138151 LOC106606801 other upstream 240528 4394745 ~ 4421260 (-)
G1138232 NA other upstream 465278 4619495 ~ 4620179 (-)
G1138568 NA other upstream 1003948 5158165 ~ 5162954 (-)
G1138553 LOC106592646 other upstream 1046838 5201055 ~ 5262513 (-)
LOC118936520 NA other upstream 1063474 5216411 ~ 5244441 (-)

Expression


Co-expression Network